RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 TPGS2Q68CL5 300 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 ZNF787Q6DD87 383 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 KIAA1841Q6NSI8 718 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 TRNP1Q6NT89 227 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 LILRA6Q6PI73 481 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 FAM183BPQ6ZVS7 135 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 ARCQ7LC44 396 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 ZDHHC17Q8IUH5 632 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 SPATA2LQ8IUW3 424 aaPredicted RBP10.21□□□□□ -0.77
CUBN-204ENST00000438254 TDHQ8IZJ6 230 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 ATAD1Q8NBU5 361 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 ZNF461Q8TAF7 563 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 CLEC4CQ8WTT0 213 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 AUTS2Q8WXX7 1259 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 CALR3Q96L12 384 aaKnown RBP10.21□□□□□ -0.77
CUBN-204ENST00000438254 TGS1Q96RS0 853 aaKnown RBP10.21□□□□□ -0.77
CUBN-204ENST00000438254 WDR24Q96S15 920 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 NUP85Q9BW27 656 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 TRIM7Q9C029 511 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 ALG13Q9NP73 1137 aaKnown RBP10.21□□□□□ -0.77
CUBN-204ENST00000438254 MRPL17Q9NRX2 175 aaKnown RBP10.21□□□□□ -0.77
CUBN-204ENST00000438254 AFF4Q9UHB7 1163 aaKnown RBP10.21□□□□□ -0.77
CUBN-204ENST00000438254 SSX2IPQ9Y2D8 614 aa10.21□□□□□ -0.77
CUBN-204ENST00000438254 ARIH1Q9Y4X5 557 aaPredicted RBP10.21□□□□□ -0.77
CUBN-204ENST00000438254 CEP290O15078 2479 aa10.21□□□□□ -0.78
CUBN-204ENST00000438254 H3BNC9 293 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 C2CD2LO14523 706 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 GRM6O15303 877 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 TEX28O15482 410 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 BUB1O43683 1085 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 BUB1BO60566 1050 aaPredicted RBP10.2□□□□□ -0.78
CUBN-204ENST00000438254 GJB6O95452 261 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 SEC24AO95486 1093 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 CNPP09543 421 aaKnown RBP10.2□□□□□ -0.78
CUBN-204ENST00000438254 CPB1P15086 417 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 NDUFV1P49821 464 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 PLXNA3P51805 1871 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 RPL7AP62424 266 aaKnown RBP10.2□□□□□ -0.78
CUBN-204ENST00000438254 SLC6A3Q01959 620 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 OGDHQ02218 1023 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 CREMQ03060 361 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 RAB30Q15771 203 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 ATG2AQ2TAZ0 1938 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 LIN9Q5TKA1 542 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 PM20D1Q6GTS8 502 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 C11orf63Q6NUN7 778 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 SLC26A9Q7LBE3 791 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 MRPL43Q8N983 215 aaKnown RBP10.2□□□□□ -0.78
CUBN-204ENST00000438254 MSANTD4Q8NCY6 345 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 JOSD2Q8TAC2 188 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 FEZF2Q8TBJ5 459 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 ZNF564Q8TBZ8 553 aaPredicted RBP10.2□□□□□ -0.78
CUBN-204ENST00000438254 IPO4Q8TEX9 1081 aaKnown RBP10.2□□□□□ -0.78
CUBN-204ENST00000438254 FNIP1Q8TF40 1166 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 POF1BQ8WVV4 589 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 SPATA17Q96L03 361 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 CEP295NLQ96MC4 621 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 C16orf45Q96MC5 204 aaPredicted RBP10.2□□□□□ -0.78
CUBN-204ENST00000438254 PGLYRP2Q96PD5 576 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 C11orf84Q9BUA3 381 aaPredicted RBP10.2□□□□□ -0.78
CUBN-204ENST00000438254 MIS12Q9H081 205 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 MRPL47Q9HD33 250 aaKnown RBP10.2□□□□□ -0.78
CUBN-204ENST00000438254 CNGB3Q9NQW8 809 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 PARVAQ9NVD7 372 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 ABI2Q9NYB9 513 aaPredicted RBP10.2□□□□□ -0.78
CUBN-204ENST00000438254 CTTNBP2NLQ9P2B4 639 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 MAFFQ9ULX9 164 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 SCINQ9Y6U3 715 aa10.2□□□□□ -0.78
CUBN-204ENST00000438254 GREB1Q4ZG55 1949 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 C2orf71A6NGG8 1288 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 C3orf80F5H4A9 247 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 PIK3R2O00459 728 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 TRIM66O15016 1216 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 KIF5CO60282 957 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 PALMO75781 387 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 CXCL14O95715 111 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 C1RP00736 705 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 TUBB4AP04350 444 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 FYNP06241 537 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 GLI1P08151 1106 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 ATF6P18850 670 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 DNAJB2P25686 324 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 RFC1P35251 1148 aaPredicted RBP10.19□□□□□ -0.78
CUBN-204ENST00000438254 IRS1P35568 1242 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 GPR15P49685 360 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 TKTL1P51854 596 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 SLC5A3P53794 718 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 SLC8A3P57103 927 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 SNX16P57768 344 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 DAOAP59103 153 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 MRPS5P82675 430 aaKnown RBP10.19□□□□□ -0.78
CUBN-204ENST00000438254 ADIGQ0VDE8 80 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 DUSP4Q13115 394 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 ZNF569Q5MCW4 686 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 DNAJC24Q6P3W2 148 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 NUDT18Q6ZVK8 323 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 BNIPLQ7Z465 357 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 PHLDB2Q86SQ0 1253 aa10.19□□□□□ -0.78
CUBN-204ENST00000438254 SCUBE3Q8IX30 993 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms