RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 PDZD3Q86UT5 571 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 LEMD2Q8NC56 503 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 ZCCHC14Q8WYQ9 949 aaKnown RBP7.49□□□□□ -1.21
TOP3B-208ENST00000437929 GATA6Q92908 595 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 E2F7Q96AV8 911 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 TBC1D32Q96NH3 1257 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 SCNM1Q9BWG6 230 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 LRRC3Q9BY71 257 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 GPR88Q9GZN0 384 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 DUSP15Q9H1R2 295 aaPredicted RBP7.49□□□□□ -1.21
TOP3B-208ENST00000437929 ATXN3LQ9H3M9 355 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 SLC8A2Q9UPR5 921 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 WASF3Q9UPY6 502 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 INVSQ9Y283 1065 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 PCDHGA5Q9Y5G8 931 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 TIMM13Q9Y5L4 95 aaPredicted RBP7.49□□□□□ -1.21
TOP3B-208ENST00000437929 SDK1Q7Z5N4 2213 aa7.49□□□□□ -1.21
TOP3B-208ENST00000437929 CNOT1A5YKK6 2376 aaKnown RBP7.49□□□□□ -1.21
TOP3B-208ENST00000437929 LNP1A1A4G5 178 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 PATE3B3GLJ2 98 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 LAMA5O15230 3695 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 NEMFO60524 1076 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 CAVIN2O95810 425 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 EGFP01133 1207 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 XBP1P17861 261 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 GABRR2P28476 465 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 GBP1P32455 592 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 KRT2P35908 639 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 SCRN1Q12765 414 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 DUSP4Q13115 394 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 ZNF568Q3ZCX4 644 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 SEZ6Q53EL9 994 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 NAIF1Q69YI7 327 aaPredicted RBP7.48□□□□□ -1.21
TOP3B-208ENST00000437929 TRIM68Q6AZZ1 485 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 FSTL4Q6MZW2 842 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 LRSAM1Q6UWE0 723 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 ALKAL1Q6UXT8 129 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 BNC2Q6ZN30 1099 aaPredicted RBP7.48□□□□□ -1.21
TOP3B-208ENST00000437929 ACAD11Q709F0 780 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 GAREM2Q75VX8 874 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 HAUS6Q7Z4H7 955 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 CATSPER3Q86XQ3 398 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 TRIM42Q8IWZ5 723 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 SYNPOQ8N3V7 929 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 TTC9BQ8N6N2 239 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 BPIFB1Q8TDL5 484 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 GPBAR1Q8TDU6 330 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 NUP210Q8TEM1 1887 aaPredicted RBP7.48□□□□□ -1.21
TOP3B-208ENST00000437929 ZNF274Q96GC6 653 aaPredicted RBP7.48□□□□□ -1.21
TOP3B-208ENST00000437929 TMEM209Q96SK2 561 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 CCDC94Q9BW85 323 aaPredicted RBP7.48□□□□□ -1.21
TOP3B-208ENST00000437929 NRSN2Q9GZP1 204 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 CDT1Q9H211 546 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 TMEM60Q9H2L4 133 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 CCDC86Q9H6F5 360 aaKnown RBP7.48□□□□□ -1.21
TOP3B-208ENST00000437929 TOPORSQ9NS56 1045 aaPredicted RBP7.48□□□□□ -1.21
TOP3B-208ENST00000437929 SLC38A7Q9NVC3 462 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 TUBGCP4Q9UGJ1 667 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 NBEAQ8NFP9 2946 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 CEP295Q9C0D2 2601 aa7.48□□□□□ -1.21
TOP3B-208ENST00000437929 AKAP13Q12802 2813 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 ARHGEF35A5YM69 484 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 OTOL1A6NHN0 477 aaPredicted RBP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 CCDC169A6NNP5 214 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 MEFVO15553 781 aaPredicted RBP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 HYAL3O43820 417 aaPredicted RBP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 WISP1O95388 367 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 F13A1P00488 732 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 XRCC6P12956 609 aaKnown RBP eCLIP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 CYP11B2P19099 503 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 MARCKSP29966 332 aaPredicted RBP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 EPHB3P54753 998 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 YWHAHQ04917 246 aaPredicted RBP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 SPAG1Q07617 926 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 GRSF1Q12849 480 aaKnown RBP eCLIP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 PPP2R5AQ15172 486 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 ELF2Q15723 593 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 UAP1L1Q3KQV9 507 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 ITPRIPL2Q3MIP1 535 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 XKR4Q5GH76 650 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 HP1BP3Q5SSJ5 553 aaPredicted RBP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 DAB2IPQ5VWQ8 1189 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 FAM177A1Q8N128 213 aaPredicted RBP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 ATAD1Q8NBU5 361 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 DEFB124Q8NES8 71 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 APPL2Q8NEU8 664 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 RPLP0P6Q8NHW5 317 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 CHFRQ96EP1 664 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 SCARF2Q96GP6 870 aaPredicted RBP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 ZC3H10Q96K80 434 aaKnown RBP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 IFT74Q96LB3 600 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 ACAP3Q96P50 834 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 MTMR9Q96QG7 549 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 POLR3CQ9BUI4 534 aaPredicted RBP7.47□□□□□ -1.21
TOP3B-208ENST00000437929 RUSC1Q9BVN2 902 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 EBF3Q9H4W6 596 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 RAD18Q9NS91 495 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 UBP1Q9NZI7 540 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 TNFSF13BQ9Y275 285 aa7.47□□□□□ -1.21
TOP3B-208ENST00000437929 CYP46A1Q9Y6A2 500 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms