RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 ADRB2P07550 413 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 NFICP08651 508 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 KRT19P08727 400 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 MYOGP15173 224 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 CYP3A5P20815 502 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 PSMA3P25788 255 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 RPL9P32969 192 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 CTNNB1P35222 781 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 PPM1AP35813 382 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 TSPAN7P41732 249 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 GRIA4P48058 902 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 BCAR1P56945 870 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 RBP5P82980 135 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 TAGLNQ01995 201 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 KRT17Q04695 432 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 ENPEPQ07075 957 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 CETN1Q12798 172 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 BFSP1Q12934 665 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 SLMAPQ14BN4 828 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 FXNQ16595 210 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 TMEM95Q3KNT9 176 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 XKR4Q5GH76 650 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 FAM109BQ6ICB4 259 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 KCNT2Q6UVM3 1135 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 LRSAM1Q6UWE0 723 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 ALKAL1Q6UXT8 129 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 LRRC55Q6ZSA7 311 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 FRMD5Q7Z6J6 570 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 WDR49Q8IV35 697 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 AOPEPQ8N6M6 819 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 ZSWIM2Q8NEG5 633 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 ZFPM2Q8WW38 1151 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 N4BP2L2Q92802 583 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 ALKBH8Q96BT7 664 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 TBC1D31Q96DN5 1066 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 EEF2KMTQ96G04 330 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 TMEM169Q96HH4 297 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 CNOT6LQ96LI5 555 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 MFSD14AQ96MC6 490 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 ZNF560Q96MR9 790 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 ASB16Q96NS5 453 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 TCF12Q99081 682 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 BPIFA3Q9BQP9 254 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 IER2Q9BTL4 223 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 SSBP4Q9BWG4 385 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 OSBPL2Q9H1P3 480 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 PRO3102Q9H379 93 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 PPCSQ9HAB8 311 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 CAPN10Q9HC96 672 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 TRMT1Q9NXH9 659 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 DPP3Q9NY33 737 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 ZNF69Q9UC07 566 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 XPO7Q9UIA9 1087 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 PRG3Q9Y2Y8 225 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 C2CD2Q9Y426 696 aa6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.59□□□□□ -1.35
ECHDC1-208ENST00000436638 TTC3P53804 2025 aa6.59□□□□□ -1.36
ECHDC1-208ENST00000436638 LCHNA4D1U4 455 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 LRRIQ3A6PVS8 624 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 FAM25EA8MYX2 175 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 KCNJ18B7U540 433 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 PODXLO00592 558 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 PTGESO14684 152 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 NRP1O14786 923 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 IKBKBO14920 756 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 TRAPPC3O43617 180 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 DYRK3O43781 588 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 LPXNO60711 386 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 B3GAT3O94766 335 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 DDHD2O94830 711 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 RB1P06400 928 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 GALTP07902 379 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 ESRRAP11474 423 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 LRPAP1P30533 357 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 GTF2H1P32780 548 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 CA8P35219 290 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 BMPR1AP36894 532 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 PNPLA4P41247 253 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 SLC11A1P49279 550 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 ZNF445P59923 1031 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 GSTM4Q03013 218 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 ELAVL2Q12926 359 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 MYO1EQ12965 1108 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 KCNJ12Q14500 433 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 TOMM20Q15388 145 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 ZSCAN26Q16670 478 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 INO80DQ53TQ3 878 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 FAM133BQ5BKY9 247 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 C10orf62Q5T681 223 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 LMBRD2Q68DH5 695 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 DCLRE1AQ6PJP8 1040 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 DSTYKQ6XUX3 929 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 C11orf74Q86VG3 221 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 ZNF280BQ86YH2 543 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 ZC3H3Q8IXZ2 948 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 EFCAB13Q8IY85 973 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 COLGALT2Q8IYK4 626 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 COLGALT1Q8NBJ5 622 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 GSTCDQ8NEC7 633 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms