RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 EML3Q32P44 896 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 HECTD3Q5T447 861 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 TRIM68Q6AZZ1 485 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 CC2D1AQ6P1N0 951 aaPredicted RBP13.1□□□□□ -0.31
EXT1-202ENST00000436216 GPRIN1Q7Z2K8 1008 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 IRF2BP1Q8IU81 584 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 EHBP1Q8NDI1 1231 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 ATOH1Q92858 354 aaPredicted RBP13.1□□□□□ -0.31
EXT1-202ENST00000436216 IPO9Q96P70 1041 aaKnown RBP13.1□□□□□ -0.31
EXT1-202ENST00000436216 IER2Q9BTL4 223 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 CHRDQ9H2X0 955 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 EBF3Q9H4W6 596 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 LMAN1LQ9HAT1 526 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 NDRG2Q9UN36 371 aaKnown RBP13.1□□□□□ -0.31
EXT1-202ENST00000436216 SCML2Q9UQR0 700 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 USP3Q9Y6I4 520 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 PIEZO1Q92508 2521 aa13.1□□□□□ -0.31
EXT1-202ENST00000436216 HELZP42694 1942 aaKnown RBP13.09□□□□□ -0.31
EXT1-202ENST00000436216 MYH10P35580 1976 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 LEFTY2O00292 366 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 COCHO43405 550 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 ABL1P00519 1130 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 AFPP02771 609 aaKnown RBP13.09□□□□□ -0.31
EXT1-202ENST00000436216 ARSAP15289 507 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
EXT1-202ENST00000436216 KIF11P52732 1056 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 YWHAEP62258 255 aaKnown RBP13.09□□□□□ -0.31
EXT1-202ENST00000436216 GCNT1Q02742 428 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 IFRD2Q12894 506 aaPredicted RBP13.09□□□□□ -0.31
EXT1-202ENST00000436216 LRMPQ12912 555 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 ZNF528Q3MIS6 628 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 ANKRD52Q8NB46 1076 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 TTC8Q8TAM2 541 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 ZFRQ96KR1 1074 aaKnown RBP13.09□□□□□ -0.31
EXT1-202ENST00000436216 NT5C1BQ96P26 610 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 GBP4Q96PP9 640 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 NUP62CLQ9H1M0 184 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 CYLDQ9NQC7 956 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 FAM86C1Q9NVL1 165 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 DUS2Q9NX74 493 aaKnown RBP13.09□□□□□ -0.31
EXT1-202ENST00000436216 GMIPQ9P107 970 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 FBXO4Q9UKT5 387 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 KIAA1257Q9ULG3 409 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.09□□□□□ -0.31
EXT1-202ENST00000436216 WNT6Q9Y6F9 365 aa13.09□□□□□ -0.31
EXT1-202ENST00000436216 TRDMT1O14717 391 aaKnown RBP13.08□□□□□ -0.32
EXT1-202ENST00000436216 SP9P0CG40 484 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 ERCC5P28715 1186 aaPredicted RBP13.08□□□□□ -0.32
EXT1-202ENST00000436216 IFNAR2P48551 515 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 MTAPQ13126 283 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 CCINQ13939 588 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 DPCR1Q3MIW9 517 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 TMEM196Q5HYL7 178 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 CT47A1Q5JQC4 288 aaPredicted RBP13.08□□□□□ -0.32
EXT1-202ENST00000436216 RAB41Q5JT25 222 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 RBM43Q6ZSC3 357 aaKnown RBP13.08□□□□□ -0.32
EXT1-202ENST00000436216 CCDC186Q7Z3E2 898 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 TTC30AQ86WT1 665 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 DDX42Q86XP3 938 aaKnown RBP eCLIP13.08□□□□□ -0.32
EXT1-202ENST00000436216 ZNF276Q8N554 614 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 NELL1Q92832 810 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 ATP2A3Q93084 1043 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 CNOT6LQ96LI5 555 aaKnown RBP13.08□□□□□ -0.32
EXT1-202ENST00000436216 LINC00597Q9H2U6 94 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 CCSER2Q9H7U1 834 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 ECT2Q9H8V3 914 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 TLR8Q9NR97 1041 aaKnown RBP13.08□□□□□ -0.32
EXT1-202ENST00000436216 SPATA6Q9NWH7 488 aaPredicted RBP13.08□□□□□ -0.32
EXT1-202ENST00000436216 CPQQ9Y646 472 aa13.08□□□□□ -0.32
EXT1-202ENST00000436216 RNF225M0QZC1 329 aaPredicted RBP13.07□□□□□ -0.32
EXT1-202ENST00000436216 LAMTOR5O43504 91 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 TLR5O60602 858 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 PAEPP09466 180 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 VDRP11473 427 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 GJA4P35212 333 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 MRE11P49959 708 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 AMPD2Q01433 879 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 LRRC32Q14392 662 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 GAS6Q14393 721 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 PON2Q15165 354 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 PKDCCQ504Y2 493 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 SGO2Q562F6 1265 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 DGKKQ5KSL6 1271 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 KLHDC10Q6PID8 442 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 ADGRG2Q8IZP9 1017 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 PPM1KQ8N3J5 372 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 SYNPOQ8N3V7 929 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 CPA6Q8N4T0 437 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 GPT2Q8TD30 523 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 KAT5Q92993 513 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 JAKMIP2Q96AA8 810 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 KREMEN1Q96MU8 473 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 THAP9Q9H5L6 903 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 NMUR1Q9HB89 426 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 PRMT8Q9NR22 394 aaPredicted RBP13.07□□□□□ -0.32
EXT1-202ENST00000436216 OSER1Q9NX31 292 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 SMPD4Q9NXE4 827 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 CNTN6Q9UQ52 1028 aa13.07□□□□□ -0.32
EXT1-202ENST00000436216 E2F8A0AVK6 867 aa13.06□□□□□ -0.32
EXT1-202ENST00000436216 O00370 1275 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms