RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 USP4Q13107 963 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 PTPRNQ16849 979 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 ARHGAP40Q5TG30 622 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 OVOS1Q6IE37 1185 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 DBX2Q6ZNG2 339 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 TMEM150AQ86TG1 271 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 FOXJ1Q92949 421 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 SNX21Q969T3 373 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 DNAJC19Q96DA6 116 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 TMEM176AQ96HP8 235 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 ZNF419Q96HQ0 510 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-214ENST00000435747 CLIC6Q96NY7 704 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 USP28Q96RU2 1077 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 PLEKHA5Q9HAU0 1116 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 PARVGQ9HBI0 331 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 ZDHHC4Q9NPG8 344 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 KCNK4Q9NYG8 393 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 TUBGCP4Q9UGJ1 667 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 CYP8B1Q9UNU6 501 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 BTBD3Q9Y2F9 522 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 STYXL1Q9Y6J8 313 aa11.18□□□□□ -0.62
CPNE1-214ENST00000435747 RELNP78509 3460 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 H0YCG3 227 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 CLDN3O15551 220 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-214ENST00000435747 KRT38O76015 456 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 CLTAP09496 248 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 GABRG2P18507 467 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 NASPP49321 788 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-214ENST00000435747 TMPRSS3P57727 454 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 RTP5Q14D33 572 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 SLC39A14Q15043 492 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 ENOX2Q16206 610 aaKnown RBP11.17□□□□□ -0.62
CPNE1-214ENST00000435747 EMC10Q5UCC4 262 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 BROXQ5VW32 411 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 DSTYKQ6XUX3 929 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 ZNF574Q6ZN55 896 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-214ENST00000435747 SFTPA1Q8IWL2 248 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 ZCCHC9Q8N567 271 aaKnown RBP11.17□□□□□ -0.62
CPNE1-214ENST00000435747 LGMNQ99538 433 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 TCHPQ9BT92 498 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 FAM117AQ9C073 453 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 NRSN2Q9GZP1 204 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 LINC00597Q9H2U6 94 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 TRPC7Q9HCX4 862 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 STK17AQ9UEE5 414 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 CPSF3Q9UKF6 684 aaKnown RBP11.17□□□□□ -0.62
CPNE1-214ENST00000435747 TMEM131Q92545 1883 aa11.17□□□□□ -0.62
CPNE1-214ENST00000435747 ANAPC1Q9H1A4 1944 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 FRMD3A2A2Y4 597 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 MEI4A8MW99 385 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 TISP43B9A030 160 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 ANKRD63C9JTQ0 380 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 K7ENM7 598 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 HNRNPDLO14979 420 aaKnown RBP11.16□□□□□ -0.62
CPNE1-214ENST00000435747 STX6O43752 255 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 KAT7O95251 611 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 CKMP06732 381 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 USP17L7P0C7H9 530 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 HARSP12081 509 aaKnown RBP11.16□□□□□ -0.62
CPNE1-214ENST00000435747 KRT10P13645 584 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 CYP3A5P20815 502 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 ACTN2P35609 894 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 KIR2DL1P43626 348 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-214ENST00000435747 UCNP55089 124 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 DHX8Q14562 1220 aaKnown RBP11.16□□□□□ -0.62
CPNE1-214ENST00000435747 HLA-BQ31612 363 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 SLC39A12Q504Y0 691 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 ZC2HC1CQ53FD0 456 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-214ENST00000435747 ZNF720Q7Z2F6 126 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 MYCT1Q8N699 235 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 TTC9Q92623 222 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 PNKPQ96T60 521 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 MIR1-1HGQ9H1L0 117 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 IKZF4Q9H2S9 585 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 TMEM206Q9H813 350 aa11.16□□□□□ -0.62
CPNE1-214ENST00000435747 UTP20O75691 2785 aaKnown RBP11.16□□□□□ -0.62
CPNE1-214ENST00000435747 SCN1AP35498 2009 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 TRAV19A0A0A6YYK7 116 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 LACTBL1A8MY62 500 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 PPEF2O14830 753 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 OGTO15294 1046 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 BRINP1O60477 761 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 FAM13AO94988 1023 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 CHRM1P11229 460 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-214ENST00000435747 HMGA1P17096 107 aaKnown RBP11.15□□□□□ -0.62
CPNE1-214ENST00000435747 TYMPP19971 482 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 GRK6P43250 576 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 SLC6A11P48066 632 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 LIG4P49917 911 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 CDR1P51861 262 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 SPAG1Q07617 926 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 KCNA1Q09470 495 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 GAB4Q2WGN9 574 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 CRELD2Q6UXH1 353 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-214ENST00000435747 TRMT11Q7Z4G4 463 aaKnown RBP11.15□□□□□ -0.62
CPNE1-214ENST00000435747 SFR1Q86XK3 245 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 LINC00301Q8NCQ3 95 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 SH3RF2Q8TEC5 729 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 FGFBP2Q9BYJ0 223 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms