RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 MED10Q9BTT4 135 aa16.7■□□□□ 0.26
NUP50-210ENST00000434760 LINC00597Q9H2U6 94 aa16.7■□□□□ 0.26
NUP50-210ENST00000434760 SMPD4Q9NXE4 827 aa16.7■□□□□ 0.26
NUP50-210ENST00000434760 GMIPQ9P107 970 aa16.7■□□□□ 0.26
NUP50-210ENST00000434760 MYO18AQ92614 2054 aaKnown RBP16.69■□□□□ 0.26
NUP50-210ENST00000434760 HHLA1C9JL84 531 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 SCAMP3O14828 347 aaKnown RBP16.69■□□□□ 0.26
NUP50-210ENST00000434760 COCHO43405 550 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 CILPO75339 1184 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 NFATC1O95644 943 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 KRT13P13646 458 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 DRD1P21728 446 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 GTF2H1P32780 548 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 PRCPP42785 496 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 PMS1P54277 932 aaKnown RBP16.69■□□□□ 0.26
NUP50-210ENST00000434760 NUCB2P80303 420 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 ADAM9Q13443 819 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 CLEC20AQ6ZU45 233 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 FILIP1Q7Z7B0 1213 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 LONP2Q86WA8 852 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 RMDN1Q96DB5 314 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 CYP3A43Q9HB55 503 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 NCDNQ9UBB6 729 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 SDK1Q7Z5N4 2213 aa16.69■□□□□ 0.26
NUP50-210ENST00000434760 HRO43593 1189 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 MXI1P50539 228 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 GALK1P51570 392 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 AMPD2Q01433 879 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 ZNF658Q5TYW1 1059 aaPredicted RBP16.68■□□□□ 0.26
NUP50-210ENST00000434760 HEATR6Q6AI08 1181 aaKnown RBP16.68■□□□□ 0.26
NUP50-210ENST00000434760 WDR5BQ86VZ2 330 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 ERCC4Q92889 916 aaPredicted RBP16.68■□□□□ 0.26
NUP50-210ENST00000434760 CD101Q93033 1021 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 GSDMAQ96QA5 445 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 HNRNPABQ99729 332 aaKnown RBP16.68■□□□□ 0.26
NUP50-210ENST00000434760 ARID3AQ99856 593 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
NUP50-210ENST00000434760 IMPG2Q9BZV3 1241 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 CCSER2Q9H7U1 834 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 MMRN2Q9H8L6 949 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 PARD6AQ9NPB6 346 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 POLR3BQ9NW08 1133 aaPredicted RBP16.68■□□□□ 0.26
NUP50-210ENST00000434760 RMND1Q9NWS8 449 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 CFAP97Q9P2B7 532 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 NCOR2Q9Y618 2525 aa16.68■□□□□ 0.26
NUP50-210ENST00000434760 ABL1P00519 1130 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 MBL2P11226 248 aaPredicted RBP16.67■□□□□ 0.26
NUP50-210ENST00000434760 ID4P47928 161 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 MAP3K7CLP57077 242 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 MESP2Q0VG99 397 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 LPAL2Q16609 132 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 FBXO43Q4G163 708 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 KRT39Q6A163 491 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 LAIR1Q6GTX8 287 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 CCDC34Q96HJ3 373 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 COMMD8Q9NX08 183 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 PCDHA5Q9Y5H7 936 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 TNRC6BQ9UPQ9 1833 aaKnown RBP16.67■□□□□ 0.26
NUP50-210ENST00000434760 NUP205Q92621 2012 aa16.67■□□□□ 0.26
NUP50-210ENST00000434760 CCDC163A0A0D9SF12 145 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 TRIM49BA6NDI0 452 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 ANTXRLA6NF34 631 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 SLC16A3O15427 465 aaKnown RBP16.66■□□□□ 0.26
NUP50-210ENST00000434760 CYP26A1O43174 497 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 FAM200BP0CF97 657 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 EPB41P11171 864 aaKnown RBP16.66■□□□□ 0.26
NUP50-210ENST00000434760 CD58P19256 250 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 ADORA2BP29275 332 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 CNR2P34972 360 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 DHCR24Q15392 516 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 HECTD3Q5T447 861 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 C12orf40Q86WS4 652 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 DDX42Q86XP3 938 aaKnown RBP eCLIP16.66■□□□□ 0.26
NUP50-210ENST00000434760 RPLP0P6Q8NHW5 317 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 WBP2Q969T9 261 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 FAXDC2Q96IV6 333 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 TIGD1Q96MW7 591 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 NT5C1AQ9BXI3 368 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 PNPLA8Q9NP80 782 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 OSER1Q9NX31 292 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 SPTBN2O15020 2390 aa16.66■□□□□ 0.26
NUP50-210ENST00000434760 E2F8A0AVK6 867 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 CETN3O15182 167 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 GREM1O60565 184 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 PXNP49023 591 aaPredicted RBP16.65■□□□□ 0.26
NUP50-210ENST00000434760 PRR23BQ6ZRT6 265 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 SFTPA1Q8IWL2 248 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 PHTF2Q8N3S3 785 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 FBXL13Q8NEE6 735 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 HHIPQ96QV1 700 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 CYLDQ9NQC7 956 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 DLL3Q9NYJ7 618 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 CHORDC1Q9UHD1 332 aaPredicted RBP16.65■□□□□ 0.26
NUP50-210ENST00000434760 GMEB2Q9UKD1 530 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 COQ4Q9Y3A0 265 aa16.65■□□□□ 0.26
NUP50-210ENST00000434760 K7EQS6 105 aa16.64■□□□□ 0.25
NUP50-210ENST00000434760 SLC9A3R1O14745 358 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms