RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 DAW1Q8N136 415 aa16.88■□□□□ 0.29
NUP50-209ENST00000432340 TMEM86AQ8N2M4 240 aa16.88■□□□□ 0.29
NUP50-209ENST00000432340 STKLD1Q8NE28 680 aa16.88■□□□□ 0.29
NUP50-209ENST00000432340 TOE1Q96GM8 510 aaKnown RBP16.88■□□□□ 0.29
NUP50-209ENST00000432340 DDX19AQ9NUU7 478 aaKnown RBP16.88■□□□□ 0.29
NUP50-209ENST00000432340 CFAP97Q9P2B7 532 aa16.88■□□□□ 0.29
NUP50-209ENST00000432340 CPQQ9Y646 472 aa16.88■□□□□ 0.29
NUP50-209ENST00000432340 GOLGA4Q13439 2230 aaKnown RBP16.88■□□□□ 0.29
NUP50-209ENST00000432340 METTL12A8MUP2 240 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 LAD1O00515 517 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 HUS1O60921 280 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 TULP3O75386 442 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 ANXA13P27216 316 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 WASP42768 502 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 MESP2Q0VG99 397 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 DCAF12L1Q5VU92 463 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 VSTM1Q6UX27 236 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 SPACA3Q8IXA5 215 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 ETFBKMTQ8IXQ9 262 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 TMEM130Q8N3G9 435 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 PHTF2Q8N3S3 785 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 IGSF8Q969P0 613 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 SPATA17Q96L03 361 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 LGMNQ99538 433 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 GPR174Q9BXC1 333 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 ZSWIM6Q9HCJ5 1215 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 GJB4Q9NTQ9 266 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 TMLHEQ9NVH6 421 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 DDX43Q9NXZ2 648 aaKnown RBP16.87■□□□□ 0.29
NUP50-209ENST00000432340 WSB2Q9NYS7 404 aaPredicted RBP16.87■□□□□ 0.29
NUP50-209ENST00000432340 LARSQ9P2J5 1176 aaKnown RBP16.87■□□□□ 0.29
NUP50-209ENST00000432340 LRWD1Q9UFC0 647 aa16.87■□□□□ 0.29
NUP50-209ENST00000432340 COL6A6A6NMZ7 2263 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 PLXND1Q9Y4D7 1925 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 SHROOM3Q8TF72 1996 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 GUCY2CP25092 1073 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 CDC25AP30304 524 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 ABCD1P33897 745 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 KCNH2Q12809 1159 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 MAPRE1Q15691 268 aaKnown RBP16.86■□□□□ 0.29
NUP50-209ENST00000432340 GRAMD4Q6IC98 578 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 DENND5BQ6ZUT9 1274 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 DIS3L2Q8IYB7 885 aaKnown RBP16.86■□□□□ 0.29
NUP50-209ENST00000432340 ZNF248Q8NDW4 579 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 MED8Q96G25 268 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 XPO6Q96QU8 1125 aaKnown RBP16.86■□□□□ 0.29
NUP50-209ENST00000432340 MSTO1Q9BUK6 570 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 NUP58Q9BVL2 599 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 SMPD4Q9NXE4 827 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 DPP3Q9NY33 737 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 BTBD3Q9Y2F9 522 aa16.86■□□□□ 0.29
NUP50-209ENST00000432340 A0A1B0GVT2 93 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 ZNF840PA6NDX5 716 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 NPC1O15118 1278 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 RFPL3O75679 317 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 OLFM2O95897 454 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 LHX1P48742 406 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 POU5F1Q01860 360 aaKnown RBP16.85■□□□□ 0.29
NUP50-209ENST00000432340 CCDC173Q0VFZ6 552 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 ANO4Q32M45 955 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 RINT1Q6NUQ1 792 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 NT5DC4Q86YG4 428 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 FMNL3Q8IVF7 1028 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 SLITRK1Q96PX8 696 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 DUSP9Q99956 384 aaKnown RBP16.85■□□□□ 0.29
NUP50-209ENST00000432340 KCND2Q9NZV8 630 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 NXF1Q9UBU9 619 aaKnown RBP16.85■□□□□ 0.29
NUP50-209ENST00000432340 SH3BP1Q9Y3L3 701 aa16.85■□□□□ 0.29
NUP50-209ENST00000432340 HEMK1Q9Y5R4 338 aaPredicted RBP16.85■□□□□ 0.29
NUP50-209ENST00000432340 KIAA1549LQ6ZVL6 1849 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 REC8O95072 547 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 MBL2P11226 248 aaPredicted RBP16.84■□□□□ 0.29
NUP50-209ENST00000432340 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
NUP50-209ENST00000432340 ZXDBP98169 803 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 TARDBPQ13148 414 aaKnown RBP eCLIP16.84■□□□□ 0.29
NUP50-209ENST00000432340 MAPK7Q13164 816 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 ORC1Q13415 861 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 TBC1D25Q3MII6 688 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 KRT79Q5XKE5 535 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 EGFLAMQ63HQ2 1017 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 C1orf186Q6ZWK4 172 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 NAT16Q8N8M0 369 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 SNX29Q8TEQ0 813 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 KCNN1Q92952 543 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 RUSC1Q9BVN2 902 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 OSGEPQ9NPF4 335 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 ITM2CQ9NQX7 267 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 GMIPQ9P107 970 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 USP36Q9P275 1121 aaKnown RBP16.84■□□□□ 0.29
NUP50-209ENST00000432340 EIF2B4Q9UI10 523 aaKnown RBP16.84■□□□□ 0.29
NUP50-209ENST00000432340 CPSF3Q9UKF6 684 aaKnown RBP16.84■□□□□ 0.29
NUP50-209ENST00000432340 GTF3C4Q9UKN8 822 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 TRIP11Q15643 1979 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 KNTC1P50748 2209 aa16.84■□□□□ 0.29
NUP50-209ENST00000432340 SFI1A8K8P3 1242 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 TRIM66O15016 1216 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 ABL1P00519 1130 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 GRIK1P39086 918 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 GRIA4P48058 902 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 MYO1EQ12965 1108 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms