RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 CYP1B1Q16678 543 aa5.73□□□□□ -1.49
PTPN4-204ENST00000431283 ZIK1Q3SY52 487 aaPredicted RBP5.73□□□□□ -1.49
PTPN4-204ENST00000431283 ZNF813Q6ZN06 617 aa5.73□□□□□ -1.49
PTPN4-204ENST00000431283 JPH3Q8WXH2 748 aaPredicted RBP5.73□□□□□ -1.49
PTPN4-204ENST00000431283 PRR25Q96S07 402 aa5.73□□□□□ -1.49
PTPN4-204ENST00000431283 GBA2Q9HCG7 927 aaPredicted RBP5.73□□□□□ -1.49
PTPN4-204ENST00000431283 SNX15Q9NRS6 342 aa5.73□□□□□ -1.49
PTPN4-204ENST00000431283 TYW1Q9NV66 732 aaKnown RBP5.73□□□□□ -1.49
PTPN4-204ENST00000431283 ANKRD62A6NC57 917 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 PHGDHO43175 533 aaKnown RBP5.72□□□□□ -1.49
PTPN4-204ENST00000431283 RGS10O43665 173 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 BCAR3O75815 825 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 FGAP02671 866 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 GKP32189 559 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 NR4A2P43354 598 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 GHRHRQ02643 423 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 TTF1Q15361 905 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-204ENST00000431283 INSCQ1MX18 579 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 ZNF260Q3ZCT1 412 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 TMEM63BQ5T3F8 832 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 SHC4Q6S5L8 630 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 PIGOQ8TEQ8 1089 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 EFHD1Q9BUP0 239 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 SCAF8Q9UPN6 1271 aaKnown RBP5.72□□□□□ -1.49
PTPN4-204ENST00000431283 SHROOM2Q13796 1616 aa5.72□□□□□ -1.49
PTPN4-204ENST00000431283 E5RJQ4 531 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 SOCS2O14508 198 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 RASAL1O95294 804 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 FGBP02675 491 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 HOXB6P17509 224 aaKnown RBP5.71□□□□□ -1.5
PTPN4-204ENST00000431283 ATP5F1P24539 256 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-204ENST00000431283 EPHA3P29320 983 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 SLC7A1P30825 629 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 LRRC41Q15345 812 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 Q4G0T1 1027 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 RNASE12Q5GAN4 147 aaKnown RBP5.71□□□□□ -1.5
PTPN4-204ENST00000431283 CACHD1Q5VU97 1274 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 AWAT2Q6E213 333 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 TMEM65Q6PI78 240 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 BCDIN3DQ7Z5W3 292 aaKnown RBP5.71□□□□□ -1.5
PTPN4-204ENST00000431283 TECPR1Q7Z6L1 1165 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 KRT73Q86Y46 540 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 C16orf71Q8IYS4 520 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-204ENST00000431283 NGDNQ8NEJ9 315 aaKnown RBP5.71□□□□□ -1.5
PTPN4-204ENST00000431283 SUCLG2Q96I99 432 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 NT5C1BQ96P26 610 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 PPP1R9BQ96SB3 815 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 ACO2Q99798 780 aaKnown RBP5.71□□□□□ -1.5
PTPN4-204ENST00000431283 RHOBTB2Q9BYZ6 727 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 ZNF518BQ9C0D4 1074 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 GABBR1Q9UBS5 961 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 DRG1Q9Y295 367 aaKnown RBP5.71□□□□□ -1.5
PTPN4-204ENST00000431283 PTPRGP23470 1445 aa5.71□□□□□ -1.5
PTPN4-204ENST00000431283 SETD1BQ9UPS6 1966 aaKnown RBP5.71□□□□□ -1.5
PTPN4-204ENST00000431283 TTBK1Q5TCY1 1321 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-204ENST00000431283 KIAA0586Q9BVV6 1533 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 PMPCBO75439 489 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 A1BGP04217 495 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 SNHG28P0DPA3 235 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 ARFIP2P53365 341 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 COPB1P53618 953 aaKnown RBP5.7□□□□□ -1.5
PTPN4-204ENST00000431283 BCAT1P54687 386 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 ANO6Q4KMQ2 910 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 PTCHD4Q6ZW05 846 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 PPP1R35Q8TAP8 253 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 OSR1Q8TAX0 266 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-204ENST00000431283 SLC35G2Q8TBE7 412 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 HS6ST2Q96MM7 605 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 WACQ9BTA9 647 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 ZMAT3Q9HA38 289 aaKnown RBP5.7□□□□□ -1.5
PTPN4-204ENST00000431283 A1CFQ9NQ94 594 aaKnown RBP5.7□□□□□ -1.5
PTPN4-204ENST00000431283 MAFFQ9ULX9 164 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 KIF27Q86VH2 1401 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 BIVM-ERCC5R4GMW8 1640 aa5.7□□□□□ -1.5
PTPN4-204ENST00000431283 MAPKBP1O60336 1514 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 TCRBV5S1A1TA0A578 114 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 M0R3H8 397 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 KCNAB3O43448 404 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 SRGAP2O75044 1071 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 MT-CO3P00414 261 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 TMEM191BP0C7N4 346 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 SCP2P22307 547 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 DNAJB14Q8TBM8 379 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 SMCR8Q8TEV9 937 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-204ENST00000431283 SPSB4Q96A44 273 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 TAAR9Q96RI9 348 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 AFG3L2Q9Y4W6 797 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 CDY1Q9Y6F8 540 aa5.69□□□□□ -1.5
PTPN4-204ENST00000431283 LOC102723971A0A1B0GUV8 181 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 TRIM38O00635 465 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 FCHO1O14526 889 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 CTNND1O60716 968 aaKnown RBP5.68□□□□□ -1.5
PTPN4-204ENST00000431283 RASSF9O75901 435 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 U2AF1L5P0DN76 240 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-204ENST00000431283 CREB1P16220 341 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 EN2P19622 333 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-204ENST00000431283 U2AF1Q01081 240 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPN4-204ENST00000431283 MCL1Q07820 350 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 PTCHD3Q3KNS1 767 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms