RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 H7C4K7 107 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 MYO1FO00160 1098 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 KCNK3O14649 394 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 SPOPO43791 374 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 SEC24AO95486 1093 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 FYNP06241 537 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 USP17L7P0C7H9 530 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 GPD1P21695 349 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 DNAJB1P25685 340 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 CTNNA2P26232 953 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 IL1R2P27930 398 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 OR1D2P34982 312 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 CTNNB1P35222 781 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 GRIK1P39086 918 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 ACADSBP45954 432 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 PEX5P50542 639 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 ATXN1P54253 815 aaKnown RBP9.32□□□□□ -0.92
SMC6-204ENST00000428868 USP46P62068 366 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 DSG1Q02413 1049 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 GPR17Q13304 367 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 MTMR3Q13615 1198 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 NAA30Q147X3 362 aaPredicted RBP9.32□□□□□ -0.92
SMC6-204ENST00000428868 LLGL1Q15334 1064 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 CDO1Q16878 200 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 KCTD19Q17RG1 926 aaPredicted RBP9.32□□□□□ -0.92
SMC6-204ENST00000428868 CCDC14Q49A88 953 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 C4orf50Q6ZRC1 276 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 ANKS3Q6ZW76 656 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 CYP4V2Q6ZWL3 525 aaPredicted RBP9.32□□□□□ -0.92
SMC6-204ENST00000428868 SLC26A9Q7LBE3 791 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 ANKS1BQ7Z6G8 1248 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 DDX53Q86TM3 631 aaKnown RBP9.32□□□□□ -0.92
SMC6-204ENST00000428868 CREG2Q8IUH2 290 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 SYCE1Q8N0S2 351 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 VPS52Q8N1B4 723 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 CFAP57Q96MR6 1250 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 RAD9AQ99638 391 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 HERPUD2Q9BSE4 406 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 DNAI2Q9GZS0 605 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 ZBP1Q9H171 429 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 LRRC4Q9HBW1 653 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 ALG13Q9NP73 1137 aaKnown RBP9.32□□□□□ -0.92
SMC6-204ENST00000428868 CYLDQ9NQC7 956 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 MTUS1Q9ULD2 1270 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 YBX2Q9Y2T7 364 aaKnown RBP9.32□□□□□ -0.92
SMC6-204ENST00000428868 INSL6Q9Y581 213 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 PCDHB5Q9Y5E4 795 aa9.32□□□□□ -0.92
SMC6-204ENST00000428868 TRIOBPQ9H2D6 2365 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 RANBP2P49792 3224 aaKnown RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 YJEFN3A6XGL0 299 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 E7ENQ6 273 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 DPYSL4O14531 572 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 LILRB3O75022 631 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 LRCH4O75427 683 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 DAB1O75553 588 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 HAPLN1P10915 354 aaPredicted RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 ATF6P18850 670 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 MAN1A1P33908 653 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 CTNNA1P35221 906 aaKnown RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 PBX2P40425 430 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 SLC5A3P53794 718 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 ERVFC1P60507 584 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 MRPS5P82675 430 aaKnown RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 ATP11AP98196 1134 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 SLC25A11Q02978 314 aaKnown RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 DUSP4Q13115 394 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 MAPRE1Q15691 268 aaKnown RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 NFE2Q16621 373 aaPredicted RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 CFAP221Q4G0U5 840 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 SYPL2Q5VXT5 272 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 SLC8B1Q6J4K2 584 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 CC2D1AQ6P1N0 951 aaPredicted RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 DEFB106AQ8N104 65 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 SIX6OS1Q8N1H7 587 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 NIPA2Q8N8Q9 360 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 PHOSPHO2Q8TCD6 241 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 TSC1Q92574 1164 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 RNPC3Q96LT9 517 aaKnown RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 TBCBQ99426 244 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 SEPT5Q99719 369 aaPredicted RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 C11orf84Q9BUA3 381 aaPredicted RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 MAGEB5Q9BZ81 275 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMC6-204ENST00000428868 IP6K2Q9UHH9 426 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 BACE2Q9Y5Z0 518 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 USP3Q9Y6I4 520 aa9.31□□□□□ -0.92
SMC6-204ENST00000428868 V9GYY5 206 aaPredicted RBP9.31□□□□□ -0.92
SMC6-204ENST00000428868 NUP210Q8TEM1 1887 aaPredicted RBP9.3□□□□□ -0.92
SMC6-204ENST00000428868 CDH23Q9H251 3354 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 TCRBV7S2A1N4TA0A589 114 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 PI4K2BG5E9Z4 385 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 CEP104O60308 925 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 ZBED1O96006 694 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 URODP06132 367 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 CA3P07451 260 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 PYGMP11217 842 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 PDGFRAP16234 1089 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 TCP1P17987 556 aaKnown RBP9.3□□□□□ -0.92
SMC6-204ENST00000428868 MIPP30301 263 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 PPM1AP35813 382 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms