RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 XRRA1Q6P2D8 792 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 UNC45BQ8IWX7 931 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 OR6Y1Q8NGX8 325 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 MIPOL1Q8TD10 442 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 TSNARE1Q96NA8 513 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 NDNQ99608 321 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 SUDS3Q9H7L9 328 aaPredicted RBP11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 JPH1Q9HDC5 661 aaPredicted RBP11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 ZNRF3Q9ULT6 936 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 SLC4A7Q9Y6M7 1214 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 TRDMT1O14717 391 aaKnown RBP11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 KLF11O14901 512 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 CAP2P40123 477 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 CDK7P50613 346 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 RTP1P59025 263 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 PGM5Q15124 567 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 EZH1Q92800 747 aaPredicted RBP11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 SERAC1Q96JX3 654 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 LRGUKQ96M69 825 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 KCNK16Q96T55 309 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 WDR46O15213 610 aaKnown RBP11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 SERPINA6P08185 405 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 NR3C2P08235 984 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 RFC1P35251 1148 aaPredicted RBP11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 MRPS9P82933 396 aaKnown RBP11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 MSS51Q4VC12 460 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 ZBTB8OSQ8IWT0 167 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 NRG4Q8WWG1 115 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 SIKE1Q9BRV8 207 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 XAB2Q9HCS7 855 aaKnown RBP11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 NRBP2Q9NSY0 501 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 PLLPQ9Y342 182 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 FARP1Q9Y4F1 1045 aaPredicted RBP11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 JAG1P78504 1218 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 SLC18A2Q05940 514 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 ZNF667Q5HYK9 610 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 SLC39A4Q6P5W5 647 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 DHDDSQ86SQ9 333 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 GATA6Q92908 595 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 CLPTM1LQ96KA5 538 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 FBXO40Q9UH90 709 aa11.19□□□□□ -0.62
ATP2C1-204ENST00000428331 ACO1P21399 889 aaKnown RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 BMPR2Q13873 1038 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 GPRASP2Q96D09 838 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 TNRC6CQ9HCJ0 1690 aaKnown RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 PRR5-ARHGAP8B1AHC4 643 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 TMEM63AO94886 807 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 GARSP41250 739 aaKnown RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 ARHGAP8P85298 464 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 GAD2Q05329 585 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 R3HDM1Q15032 1099 aaKnown RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 CCDC14Q49A88 953 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 FAM102AQ5T9C2 384 aaPredicted RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 OR6B2Q6IFH4 312 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 NSUN6Q8TEA1 469 aaKnown RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 PYDC1Q8WXC3 89 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 MECRQ9BV79 373 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 APOBEC3GQ9HC16 384 aaKnown RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 COL20A1Q9P218 1284 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 SLC7A8Q9UHI5 535 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 DNAJC16Q9Y2G8 782 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 A0A0B4J269 797 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 SMIM31A0A1B0GVY4 71 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 SIGLEC16A6NMB1 481 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 STK10O94804 968 aaKnown RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 CCNE2O96020 404 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 FGFR1P11362 822 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 P4HA1P13674 534 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 NEK3P51956 506 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 GDF10P55107 478 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 WASHC5Q12768 1159 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 CDC16Q13042 620 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 BAATQ14032 418 aaPredicted RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 CDO1Q16878 200 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 ANGEL2Q5VTE6 544 aaKnown RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 TXNRD3NBQ6F5E7 133 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 ACAD11Q709F0 780 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 SPATA24Q86W54 205 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 EMC1Q8N766 993 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 FAM81AQ8TBF8 368 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 LPAR1Q92633 364 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 ZBTB45Q96K62 511 aaPredicted RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 SPATA16Q9BXB7 569 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 GCOM2Q9BZD3 368 aaPredicted RBP11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 RNF146Q9NTX7 359 aa11.18□□□□□ -0.62
ATP2C1-204ENST00000428331 ARHGAP10A1A4S6 786 aa11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 E7ESA3 106 aa11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 CHADO15335 359 aa11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 STAMBPO95630 424 aa11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 PSMC4P43686 418 aa11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 SLC27A3Q5K4L6 730 aa11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 RARS2Q5T160 578 aaKnown RBP11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 BSPRYQ5W0U4 402 aa11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 POTEAQ6S8J7 498 aa11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 RAB3IL1Q8TBN0 382 aa11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 NGRNQ9NPE2 291 aaKnown RBP11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 ARFGEF1Q9Y6D6 1849 aa11.17□□□□□ -0.62
ATP2C1-204ENST00000428331 LOC100653049A0A140TA62 436 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms