RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 GSDMAQ96QA5 445 aa19.5■□□□□ 0.71
PSPC1-202ENST00000427943 GMIPQ9P107 970 aa19.5■□□□□ 0.71
PSPC1-202ENST00000427943 CFAP97Q9P2B7 532 aa19.5■□□□□ 0.71
PSPC1-202ENST00000427943 CHORDC1Q9UHD1 332 aaPredicted RBP19.5■□□□□ 0.71
PSPC1-202ENST00000427943 SPAG17Q6Q759 2223 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 TRIM49BA6NDI0 452 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 RNF40O75150 1001 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 SMC2O95347 1197 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 NFATC1O95644 943 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 PMS1P54277 932 aaKnown RBP19.49■□□□□ 0.71
PSPC1-202ENST00000427943 DCAF17Q5H9S7 520 aaPredicted RBP19.49■□□□□ 0.71
PSPC1-202ENST00000427943 KRT39Q6A163 491 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 CCDC150Q8NCX0 1101 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 OVCA2Q8WZ82 227 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 EZH1Q92800 747 aaPredicted RBP19.49■□□□□ 0.71
PSPC1-202ENST00000427943 SEMA4DQ92854 862 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 CD101Q93033 1021 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 TSG101Q99816 390 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 NT5C1AQ9BXI3 368 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 CCSER2Q9H7U1 834 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 CYP3A43Q9HB55 503 aa19.49■□□□□ 0.71
PSPC1-202ENST00000427943 COCHO43405 550 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 CILPO75339 1184 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 FAM200BP0CF97 657 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 TRIM21P19474 475 aaKnown RBP19.48■□□□□ 0.71
PSPC1-202ENST00000427943 DRD1P21728 446 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 GTF2H1P32780 548 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 NR1H3Q13133 447 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 TCERG1LQ5VWI1 586 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 ANKRD40Q6AI12 368 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 ISM2Q6H9L7 571 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 PRR23BQ6ZRT6 265 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 GPRIN1Q7Z2K8 1008 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 SPATA20Q8TB22 786 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 WHAMMQ8TF30 809 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 CSNK1G1Q9HCP0 422 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 POLR3BQ9NW08 1133 aaPredicted RBP19.48■□□□□ 0.71
PSPC1-202ENST00000427943 IL37Q9NZH6 218 aa19.48■□□□□ 0.71
PSPC1-202ENST00000427943 CYP17A1P05093 508 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 PGFP49763 221 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 ZNF394Q53GI3 561 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 COBLL1Q53SF7 1204 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 HECTD3Q5T447 861 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 CLEC20AQ6ZU45 233 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 LONP2Q86WA8 852 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 FBXL13Q8NEE6 735 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 EXOC4Q96A65 974 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 CYFIP2Q96F07 1278 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 ZFRQ96KR1 1074 aaKnown RBP19.47■□□□□ 0.71
PSPC1-202ENST00000427943 TIGD1Q96MW7 591 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 RAB23Q9ULC3 237 aa19.47■□□□□ 0.71
PSPC1-202ENST00000427943 FAM92AA1XBS5 289 aa19.46■□□□□ 0.71
PSPC1-202ENST00000427943 OPRD1P41143 372 aa19.46■□□□□ 0.71
PSPC1-202ENST00000427943 PXNP49023 591 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-202ENST00000427943 GAB4Q2WGN9 574 aa19.46■□□□□ 0.71
PSPC1-202ENST00000427943 CBWD6Q4V339 395 aa19.46■□□□□ 0.71
PSPC1-202ENST00000427943 CBWD3Q5JTY5 395 aa19.46■□□□□ 0.71
PSPC1-202ENST00000427943 CBWD5Q5RIA9 395 aa19.46■□□□□ 0.71
PSPC1-202ENST00000427943 DDX42Q86XP3 938 aaKnown RBP eCLIP19.46■□□□□ 0.71
PSPC1-202ENST00000427943 ZC3H3Q8IXZ2 948 aaKnown RBP19.46■□□□□ 0.71
PSPC1-202ENST00000427943 RPLP0P6Q8NHW5 317 aa19.46■□□□□ 0.71
PSPC1-202ENST00000427943 HNRNPABQ99729 332 aaKnown RBP19.46■□□□□ 0.71
PSPC1-202ENST00000427943 ARID3AQ99856 593 aa19.46■□□□□ 0.71
PSPC1-202ENST00000427943 COMMD8Q9NX08 183 aa19.46■□□□□ 0.71
PSPC1-202ENST00000427943 RAB20Q9NX57 234 aa19.46■□□□□ 0.71
PSPC1-202ENST00000427943 HOOK1Q9UJC3 728 aaKnown RBP19.46■□□□□ 0.71
PSPC1-202ENST00000427943 DCHS1Q96JQ0 3298 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 HHLA1C9JL84 531 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 SLC16A3O15427 465 aaKnown RBP19.45■□□□□ 0.7
PSPC1-202ENST00000427943 HRO43593 1189 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 STX10O60499 249 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 ZDHHC11BP0C7U3 371 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 IRF1P10914 325 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 ID4P47928 161 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 MCCD1P59942 119 aaPredicted RBP19.45■□□□□ 0.7
PSPC1-202ENST00000427943 FKBP3Q00688 224 aaKnown RBP19.45■□□□□ 0.7
PSPC1-202ENST00000427943 SIM2Q14190 667 aaPredicted RBP19.45■□□□□ 0.7
PSPC1-202ENST00000427943 FBXO43Q4G163 708 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 PPP1R26Q5T8A7 1209 aaPredicted RBP19.45■□□□□ 0.7
PSPC1-202ENST00000427943 SNX30Q5VWJ9 437 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 SECISBP2LQ93073 1101 aaKnown RBP19.45■□□□□ 0.7
PSPC1-202ENST00000427943 HHIPQ96QV1 700 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 NACA2Q9H009 215 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 FBXO44Q9H4M3 255 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 GMEB2Q9UKD1 530 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 MAN1B1Q9UKM7 699 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 SLC8A2Q9UPR5 921 aa19.45■□□□□ 0.7
PSPC1-202ENST00000427943 SLC9A3R1O14745 358 aaPredicted RBP19.44■□□□□ 0.7
PSPC1-202ENST00000427943 CYP26A1O43174 497 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 ATG13O75143 517 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 ACO1P21399 889 aaKnown RBP19.44■□□□□ 0.7
PSPC1-202ENST00000427943 TUBP50607 506 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 SEC13P55735 322 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 LRRC63Q05C16 580 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 DHCR24Q15392 516 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 WDR5BQ86VZ2 330 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 ADGRG2Q8IZP9 1017 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 TATDN2Q93075 761 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 WBP2Q969T9 261 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 TLR8Q9NR97 1041 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms