RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 COL28A1Q2UY09 1125 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 PKN3Q6P5Z2 889 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 VSTM1Q6UX27 236 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 INTS8Q75QN2 995 aaKnown RBP13.54□□□□□ -0.24
SGCE-203ENST00000425444 PROSER1Q86XN7 944 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 FAM186BQ8IYM0 893 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 SMYD4Q8IYR2 804 aaPredicted RBP13.54□□□□□ -0.24
SGCE-203ENST00000425444 TMC2Q8TDI7 906 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 RSPRY1Q96DX4 576 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 PCED1BQ96HM7 432 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 MKNK1Q9BUB5 465 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 IMPG2Q9BZV3 1241 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 DUSP15Q9H1R2 295 aaPredicted RBP13.54□□□□□ -0.24
SGCE-203ENST00000425444 SMYD3Q9H7B4 428 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 MMRN2Q9H8L6 949 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 ZMYM5Q9UJ78 669 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 KHNYNO15037 678 aaKnown RBP13.53□□□□□ -0.24
SGCE-203ENST00000425444 MAPK13O15264 365 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 PRAMEF12O95522 483 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 FAM163BP0C2L3 166 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 TRIM49P0CI25 452 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 TRIM49CP0CI26 452 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 DDX6P26196 483 aaKnown RBP eCLIP13.53□□□□□ -0.24
SGCE-203ENST00000425444 PSMC2P35998 433 aaKnown RBP13.53□□□□□ -0.24
SGCE-203ENST00000425444 MAGEA11P43364 429 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 ADAM9Q13443 819 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 MAB21L3Q8N8X9 362 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 B3GALNT2Q8NCR0 500 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 MYCBPAPQ8TBZ2 947 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 SMARCE1Q969G3 411 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 ELMO3Q96BJ8 720 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 TSG101Q99816 390 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 SLC46A2Q9BY10 475 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 SMG9Q9H0W8 520 aaKnown RBP13.53□□□□□ -0.24
SGCE-203ENST00000425444 DPEP3Q9H4B8 488 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 VRTNQ9H8Y1 702 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 TRPC7Q9HCX4 862 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 GTSE1Q9NYZ3 720 aa13.53□□□□□ -0.24
SGCE-203ENST00000425444 URB1O60287 2271 aaKnown RBP13.53□□□□□ -0.24
SGCE-203ENST00000425444 CDX4O14627 284 aaPredicted RBP13.52□□□□□ -0.25
SGCE-203ENST00000425444 IKBKBO14920 756 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 TRIM66O15016 1216 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 DCLK1O15075 740 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 VNN1O95497 513 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 F11P03951 625 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 PTPN1P18031 435 aaKnown RBP13.52□□□□□ -0.25
SGCE-203ENST00000425444 CDH8P55286 799 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 FCHO2Q0JRZ9 810 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 SGSM1Q2NKQ1 1148 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 ZACNQ401N2 412 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 ARHGAP29Q52LW3 1261 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 ZNF658Q5TYW1 1059 aaPredicted RBP13.52□□□□□ -0.25
SGCE-203ENST00000425444 TXNDC8Q6A555 127 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 SV2AQ7L0J3 742 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 TMEM150AQ86TG1 271 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 CMTM8Q8IZV2 173 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 TTC16Q8NEE8 873 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 ENGASEQ8NFI3 743 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 BPIFB1Q8TDL5 484 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 ERCC4Q92889 916 aaPredicted RBP13.52□□□□□ -0.25
SGCE-203ENST00000425444 TRMT2BQ96GJ1 504 aaKnown RBP13.52□□□□□ -0.25
SGCE-203ENST00000425444 ZFYVE19Q96K21 471 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 BBC3Q96PG8 261 aaPredicted RBP13.52□□□□□ -0.25
SGCE-203ENST00000425444 GSDMAQ96QA5 445 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 MED10Q9BTT4 135 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 ELOVL4Q9GZR5 314 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 SLC32A1Q9H598 525 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.52□□□□□ -0.25
SGCE-203ENST00000425444 THG1LQ9NWX6 298 aaKnown RBP13.52□□□□□ -0.25
SGCE-203ENST00000425444 OBP2AQ9NY56 170 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 EHD2Q9NZN4 543 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 NME7Q9Y5B8 376 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 ATP8B3O60423 1300 aa13.52□□□□□ -0.25
SGCE-203ENST00000425444 NUP210Q8TEM1 1887 aaPredicted RBP13.52□□□□□ -0.25
SGCE-203ENST00000425444 CETN3O15182 167 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 ATG13O75143 517 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 HLA-DRAP01903 254 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 CKMP06732 381 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 EPB41P11171 864 aaKnown RBP13.51□□□□□ -0.25
SGCE-203ENST00000425444 TRIM21P19474 475 aaKnown RBP13.51□□□□□ -0.25
SGCE-203ENST00000425444 WEE1P30291 646 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 GCLMP48507 274 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 SIM1P81133 766 aaPredicted RBP13.51□□□□□ -0.25
SGCE-203ENST00000425444 PLCB2Q00722 1185 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 EDRF1Q3B7T1 1238 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 DENND5BQ6ZUT9 1274 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 CCDC150Q8NCX0 1101 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 TAF4BQ92750 862 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 EEF2KMTQ96G04 330 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 TNIP3Q96KP6 325 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 SPATA17Q96L03 361 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 TIGD1Q96MW7 591 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 HHIPQ96QV1 700 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 ZNF518BQ9C0D4 1074 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 KIF9Q9HAQ2 790 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 POLR3BQ9NW08 1133 aaPredicted RBP13.51□□□□□ -0.25
SGCE-203ENST00000425444 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
SGCE-203ENST00000425444 PI4KAP42356 2102 aa13.51□□□□□ -0.25
SGCE-203ENST00000425444 SPAARA0A1B0GVQ0 90 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 F8VP50 259 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms