RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 C8AP07357 584 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 SRGAP2BP0DMP2 458 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 ABCB4P21439 1286 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 CYP2F1P24903 491 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 NFE2Q16621 373 aaPredicted RBP16.47■□□□□ 0.23
SHOX2-202ENST00000425436 MAP9Q49MG5 647 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 LIN9Q5TKA1 542 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 C11orf63Q6NUN7 778 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 SYCE2Q6PIF2 218 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 TMC5Q6UXY8 1006 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 SPATA2LQ8IUW3 424 aaPredicted RBP16.47■□□□□ 0.23
SHOX2-202ENST00000425436 TCEAL8Q8IYN2 117 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 SLC4A11Q8NBS3 891 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 ACTRT1Q8TDG2 376 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 DDX1Q92499 740 aaKnown RBP16.47■□□□□ 0.23
SHOX2-202ENST00000425436 TMEM176AQ96HP8 235 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 SEPT5Q99719 369 aaPredicted RBP16.47■□□□□ 0.23
SHOX2-202ENST00000425436 B3GNT5Q9BYG0 378 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 THAP2Q9H0W7 228 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 CDH22Q9UJ99 828 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 PCDHB5Q9Y5E4 795 aa16.47■□□□□ 0.23
SHOX2-202ENST00000425436 CCDC195A0A1B0GUA6 201 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 C1RP00736 705 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 MMEP08473 750 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 CCDC130P13994 396 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 BDNFP23560 247 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 CLEC16AQ2KHT3 1053 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 MGAT5BQ3V5L5 792 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 PPM1LQ5SGD2 360 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 RARS2Q5T160 578 aaKnown RBP16.46■□□□□ 0.23
SHOX2-202ENST00000425436 NT5DC3Q86UY8 548 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 TTC39CQ8N584 583 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 NOA1Q8NC60 698 aaKnown RBP16.46■□□□□ 0.23
SHOX2-202ENST00000425436 OGFRQ9NZT2 677 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 CTTNBP2NLQ9P2B4 639 aa16.46■□□□□ 0.23
SHOX2-202ENST00000425436 DOCK6Q96HP0 2047 aa16.46■□□□□ 0.22
SHOX2-202ENST00000425436 MIF4GDA9UHW6 222 aaKnown RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 PDE2AO00408 941 aaPredicted RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 CCL16O15467 120 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 ZMYND10O75800 440 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 CYP1A2P05177 515 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 RHOXF2BP0C7M4 288 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 HAPLN1P10915 354 aaPredicted RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 GPR15P49685 360 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 TFF2Q03403 129 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 SMARCB1Q12824 385 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 MAPRE1Q15691 268 aaKnown RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 TAF3Q5VWG9 929 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 CC2D1AQ6P1N0 951 aaPredicted RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 C4orf50Q6ZRC1 276 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 CCDC149Q6ZUS6 474 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 PAQR9Q6ZVX9 377 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 SPPL2BQ8TCT7 592 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 SLC2A14Q8TDB8 520 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 GPR152Q8TDT2 470 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 HDAC7Q8WUI4 952 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 HES6Q96HZ4 224 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 VCPIP1Q96JH7 1222 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 MSLNLQ96KJ4 702 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 PCDHB18PQ96TA0 734 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 NAP1L3Q99457 506 aaPredicted RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 RHOXF2Q9BQY4 288 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 MED10Q9BTT4 135 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 ZNF518BQ9C0D4 1074 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 FAM124BQ9H5Z6 455 aaPredicted RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 DZANK1Q9NVP4 752 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 TAS2R14Q9NYV8 317 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 DPP7Q9UHL4 492 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 INSL5Q9Y5Q6 135 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 MYH10P35580 1976 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 PTPRDP23468 1912 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 KCNK3O14649 394 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 BUB1BO60566 1050 aaPredicted RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 ZRANB2O95218 330 aaKnown RBP eCLIP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 CD19P15391 556 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 ADORA2BP29275 332 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 CXCR5P32302 372 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 CACNA2D1P54289 1103 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 TWF1Q12792 350 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 DDR2Q16832 855 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 PPP1R26Q5T8A7 1209 aaPredicted RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 SDHAF4Q5VUM1 108 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 ELMSAN1Q6PJG2 1045 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 SCN4BQ8IWT1 228 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 FUKQ8N0W3 1084 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 RBBP8NLQ8NC74 664 aaPredicted RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 C2orf15Q8WU43 125 aaKnown RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 CYFIP2Q96F07 1278 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 S1PR5Q9H228 398 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 SFXN1Q9H9B4 322 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 ACP6Q9NPH0 428 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 TTC7AQ9ULT0 858 aaPredicted RBP16.45■□□□□ 0.22
SHOX2-202ENST00000425436 MAFFQ9ULX9 164 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 YIPF1Q9Y548 306 aa16.45■□□□□ 0.22
SHOX2-202ENST00000425436 LRG1P02750 347 aa16.44■□□□□ 0.22
SHOX2-202ENST00000425436 SSTR3P32745 418 aaPredicted RBP16.44■□□□□ 0.22
SHOX2-202ENST00000425436 PPP2R5EQ16537 467 aa16.44■□□□□ 0.22
SHOX2-202ENST00000425436 UBL4BQ8N7F7 174 aa16.44■□□□□ 0.22
SHOX2-202ENST00000425436 STKLD1Q8NE28 680 aa16.44■□□□□ 0.22
SHOX2-202ENST00000425436 GIPC2Q8TF65 315 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms