RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TMEM270Q6UE05 265 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 DDX42Q86XP3 938 aaKnown RBP eCLIP11.56□□□□□ -0.56
USP49-204ENST00000423567 CCDC105Q8IYK2 499 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 ZMIZ2Q8NF64 920 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 PJA1Q8NG27 643 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 FAM3CQ92520 227 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 ZFYVE19Q96K21 471 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 FAM81BQ96LP2 452 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 LRRC3BQ96PB8 259 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 INTS2Q9H0H0 1204 aaKnown RBP11.56□□□□□ -0.56
USP49-204ENST00000423567 TLR8Q9NR97 1041 aaKnown RBP11.56□□□□□ -0.56
USP49-204ENST00000423567 GCNT4Q9P109 453 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 CHORDC1Q9UHD1 332 aaPredicted RBP11.56□□□□□ -0.56
USP49-204ENST00000423567 ARHGAP26Q9UNA1 814 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 NCANO14594 1321 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 ARNTLO00327 626 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 BEST1O76090 585 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 PAEPP09466 180 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 MBL2P11226 248 aaPredicted RBP11.55□□□□□ -0.56
USP49-204ENST00000423567 VDRP11473 427 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 PRKCSHP14314 528 aaPredicted RBP11.55□□□□□ -0.56
USP49-204ENST00000423567 CD72P21854 359 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 MAGEA9P43362 315 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 IFNAR2P48551 515 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 TUBP50607 506 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 SLC7A9P82251 487 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 MAN2A1Q16706 1144 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 GOLGA7BQ2TAP0 167 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 PPP1R15BQ5SWA1 713 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 CCDC183Q5T5S1 534 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 GBP6Q6ZN66 633 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 RRAGAQ7L523 313 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 ENOSF1Q7L5Y1 443 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 RALGPS2Q86X27 583 aaPredicted RBP11.55□□□□□ -0.56
USP49-204ENST00000423567 ZNF687Q8N1G0 1237 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 ANKRD52Q8NB46 1076 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 DTWD2Q8NBA8 298 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 LMO3Q8TAP4 145 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 SH3RF2Q8TEC5 729 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 EXOC4Q96A65 974 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 FAM122AQ96E09 287 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 SLC22A12Q96S37 553 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 GKN1Q9NS71 199 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 ANO10Q9NW15 660 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 DUS2Q9NX74 493 aaKnown RBP11.55□□□□□ -0.56
USP49-204ENST00000423567 GTSE1Q9NYZ3 720 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 IL37Q9NZH6 218 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 GMIPQ9P107 970 aa11.55□□□□□ -0.56
USP49-204ENST00000423567 NDRG2Q9UN36 371 aaKnown RBP11.55□□□□□ -0.56
USP49-204ENST00000423567 FAM92AA1XBS5 289 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 PES1O00541 588 aaKnown RBP11.54□□□□□ -0.56
USP49-204ENST00000423567 SLC9A3R1O14745 358 aaPredicted RBP11.54□□□□□ -0.56
USP49-204ENST00000423567 OAS1P00973 400 aaKnown RBP11.54□□□□□ -0.56
USP49-204ENST00000423567 DCNP07585 359 aaKnown RBP11.54□□□□□ -0.56
USP49-204ENST00000423567 TPM2P07951 284 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 KRT5P13647 590 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 TCF3P15923 654 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 BCAT1P54687 386 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 MFAP3P55082 362 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 GOLGA8FQ08AF8 430 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 GOLGA8DPQ0D2H9 430 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 USP4Q13107 963 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 NR1H3Q13133 447 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 RUNX3Q13761 415 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 STILQ15468 1287 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 ZNF77Q15935 545 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 STX1AQ16623 288 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 EXOC3L4Q17RC7 722 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 SNX30Q5VWJ9 437 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 RBM43Q6ZSC3 357 aaKnown RBP11.54□□□□□ -0.56
USP49-204ENST00000423567 TADA2BQ86TJ2 420 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 CPA6Q8N4T0 437 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 UBR7Q8N806 425 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 PRSS33Q8NF86 280 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 TTC8Q8TAM2 541 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 OSCP1Q8WVF1 389 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 ATP2A3Q93084 1043 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 MED15Q96RN5 788 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 FAM83CQ9BQN1 747 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 UBXN6Q9BZV1 441 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 EBF3Q9H4W6 596 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 UBE2TQ9NPD8 197 aaPredicted RBP11.54□□□□□ -0.56
USP49-204ENST00000423567 SMPD4Q9NXE4 827 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 TSPAN16Q9UKR8 245 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 SCML2Q9UQR0 700 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 CPQQ9Y646 472 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 ZDBF2Q9HCK1 2354 aa11.54□□□□□ -0.56
USP49-204ENST00000423567 GTPBP10A4D1E9 387 aaKnown RBP11.53□□□□□ -0.56
USP49-204ENST00000423567 KCNJ18B7U540 433 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 SPECC1L-ADORA2AF8WAN1 911 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 LEFTY2O00292 366 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 CYP26A1O43174 497 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 NFATC1O95644 943 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 OLFM2O95897 454 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 ZDHHC11BP0C7U3 371 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 SETSIPP0DME0 302 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 RALAP11233 206 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 TARSP26639 723 aaKnown RBP11.53□□□□□ -0.56
USP49-204ENST00000423567 EEF1GP26641 437 aaKnown RBP11.53□□□□□ -0.56
USP49-204ENST00000423567 CTHP32929 405 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms