RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 KIAA0319LQ8IZA0 1049 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 DDX56Q9NY93 547 aaKnown RBP17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 SIRPGQ9P1W8 387 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 HSFX1Q9UBD0 423 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 TJP2Q9UDY2 1190 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 SLX4Q8IY92 1834 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 EP400Q96L91 3159 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 ASLP04424 464 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 EIF2AK2P19525 551 aaKnown RBP17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 HSD17B4P51659 736 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 CLDN10P78369 228 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 PDK3Q15120 406 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 TAF5Q15542 800 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 MMEL1Q495T6 779 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 SLC26A11Q86WA9 606 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 CRLF3Q8IUI8 442 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 JDP2Q8WYK2 163 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 TRIM56Q9BRZ2 755 aaKnown RBP17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 KLHL4Q9C0H6 718 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 HAPLN2Q9GZV7 340 aa17.35■□□□□ 0.37
NPC1L1-203ENST00000423141 SDR42E2A6NKP2 422 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 RFPL1O75677 317 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 SERPINA6P08185 405 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 GARTP22102 1010 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 RFC1P35251 1148 aaPredicted RBP17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 SLC25A11Q02978 314 aaKnown RBP17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 PEX6Q13608 980 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 PSMD6Q15008 389 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 TTC39BQ5VTQ0 682 aaPredicted RBP17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 ATG16L1Q676U5 607 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 DENND5BQ6ZUT9 1274 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 BBS12Q6ZW61 710 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 ADGRG6Q86SQ4 1221 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 OR5B17Q8NGF7 314 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 NTPCRQ9BSD7 190 aaKnown RBP17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 C1orf21Q9H246 121 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 CYP4F11Q9HBI6 524 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 SMYD2Q9NRG4 433 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 TMX2Q9Y320 296 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 TTLL3Q9Y4R7 772 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 UBIAD1Q9Y5Z9 338 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 EXTL3O43909 919 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 LYPLA1O75608 230 aaPredicted RBP17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 PENKP01210 267 aaPredicted RBP17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 EIF3EP60228 445 aaKnown RBP17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 DEUP1Q05D60 604 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 PIGHQ14442 188 aaPredicted RBP17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 TRIP10Q15642 601 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 SEZ6Q53EL9 994 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 NPNTQ6UXI9 565 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 LCA5Q86VQ0 697 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 WDTC1Q8N5D0 677 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 ZBTB45Q96K62 511 aaPredicted RBP17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 CEP170P1Q96L14 293 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 APOL6Q9BWW8 343 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 HOMER2Q9NSB8 354 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 TELO2Q9Y4R8 837 aa17.34■□□□□ 0.37
NPC1L1-203ENST00000423141 LRRC37AA6NMS7 1700 aa17.33■□□□□ 0.37
NPC1L1-203ENST00000423141 A0A0B4J269 797 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 LRCH4O75427 683 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 CALB1P05937 261 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 PSMA2P25787 234 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 AAGABQ6PD74 315 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 UGT2A3Q6UWM9 527 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 TRIM74Q86UV6 250 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 TRIM73Q86UV7 250 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 SAMD3Q8N6K7 520 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 JOSD2Q8TAC2 188 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 CHURC1Q8WUH1 139 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 GLIS2Q9BZE0 524 aaPredicted RBP17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 PLAC1Q9HBJ0 212 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 SLC9A2Q9UBY0 812 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 PCSK1NQ9UHG2 260 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 TCEAL9Q9UHQ7 104 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 CCPG1Q9ULG6 757 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 TMCO1Q9UM00 188 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 PCDHGB4Q9UN71 923 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 PCDHGB5Q9Y5G0 923 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 SNNO75324 88 aaPredicted RBP17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 SMIM18P0DKX4 95 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 RBP3P10745 1247 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 PIM1P11309 404 aaPredicted RBP17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 KDELR1P24390 212 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 TCHHL1Q5QJ38 904 aaPredicted RBP17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 ZNF778Q96MU6 729 aa17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 DNAAF2Q9NVR5 837 aaKnown RBP17.33■□□□□ 0.36
NPC1L1-203ENST00000423141 PROCP04070 461 aa17.32■□□□□ 0.36
NPC1L1-203ENST00000423141 ITGA2BP08514 1039 aa17.32■□□□□ 0.36
NPC1L1-203ENST00000423141 SNRPAP09012 282 aaKnown RBP17.32■□□□□ 0.36
NPC1L1-203ENST00000423141 MYCLP12524 364 aaPredicted RBP17.32■□□□□ 0.36
NPC1L1-203ENST00000423141 AOC1P19801 751 aa17.32■□□□□ 0.36
NPC1L1-203ENST00000423141 LIG4P49917 911 aa17.32■□□□□ 0.36
NPC1L1-203ENST00000423141 TUBB3Q13509 450 aa17.32■□□□□ 0.36
NPC1L1-203ENST00000423141 R3HDM1Q15032 1099 aaKnown RBP17.32■□□□□ 0.36
NPC1L1-203ENST00000423141 FAXCQ5TGI0 409 aa17.32■□□□□ 0.36
NPC1L1-203ENST00000423141 GPAT2Q6NUI2 795 aa17.32■□□□□ 0.36
NPC1L1-203ENST00000423141 RFX6Q8HWS3 928 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms