RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PNPLA8Q9NP80 782 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 COMMD8Q9NX08 183 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.78□□□□□ -0.84
PDGFC-202ENST00000422544 IL37Q9NZH6 218 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 EHD2Q9NZN4 543 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 UXTQ9UBK9 157 aaPredicted RBP9.78□□□□□ -0.84
PDGFC-202ENST00000422544 CHORDC1Q9UHD1 332 aaPredicted RBP9.78□□□□□ -0.84
PDGFC-202ENST00000422544 CDH7Q9ULB5 785 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 MYO6Q9UM54 1294 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 CAPN11Q9UMQ6 739 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 PCDHGC3Q9UN70 934 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.78□□□□□ -0.84
PDGFC-202ENST00000422544 ITIH6Q6UXX5 1313 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 MTCL1Q9Y4B5 1905 aaKnown RBP9.78□□□□□ -0.84
PDGFC-202ENST00000422544 GVINP1Q7Z2Y8 2422 aa9.77□□□□□ -0.84
PDGFC-202ENST00000422544 A0A1W2PQJ5 194 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 FAM170AA1A519 330 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 ZNF840PA6NDX5 716 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 C2CD4DB7Z1M9 353 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 TADA3O75528 432 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 ABL1P00519 1130 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 GYPCP04921 128 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 USP17L7P0C7H9 530 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 LCP1P13796 627 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 FERP16591 822 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 CHRNB2P17787 502 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 CDC25CP30307 473 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 CASP14P31944 242 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 PLA2G4AP47712 749 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 PGFP49763 221 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 TKTL1P51854 596 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 ZBED6P86452 979 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 ASIC2Q16515 512 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 RAB41Q5JT25 222 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 STXBP5Q5T5C0 1151 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 GPR158Q5T848 1215 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 SFMBT2Q5VUG0 894 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 E4F1Q66K89 784 aaPredicted RBP9.77□□□□□ -0.85
PDGFC-202ENST00000422544 TXNDC8Q6A555 127 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 OTOP3Q7RTS5 596 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 ADHFE1Q8IWW8 467 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 NPAS3Q8IXF0 933 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 ZNF397Q8NF99 534 aaPredicted RBP9.77□□□□□ -0.85
PDGFC-202ENST00000422544 KCTD13Q8WZ19 329 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 SPOCK2Q92563 424 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 NDRG1Q92597 394 aaKnown RBP9.77□□□□□ -0.85
PDGFC-202ENST00000422544 FBXO32Q969P5 355 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 SLITRK1Q96PX8 696 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 GCNAQ96QF7 691 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 LHX5Q9H2C1 402 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 FBXO44Q9H4M3 255 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 LRRC4Q9HBW1 653 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 ST7Q9NRC1 585 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 AIPL1Q9NZN9 384 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 TRPM5Q9NZQ8 1165 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 GMIPQ9P107 970 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 CYTH4Q9UIA0 394 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 NOCTQ9UK39 431 aaKnown RBP9.77□□□□□ -0.85
PDGFC-202ENST00000422544 SCML2Q9UQR0 700 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 USTQ9Y2C2 406 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 LUC7L2Q9Y383 392 aaKnown RBP9.77□□□□□ -0.85
PDGFC-202ENST00000422544 USP3Q9Y6I4 520 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 DOCK6Q96HP0 2047 aa9.77□□□□□ -0.85
PDGFC-202ENST00000422544 KMT2BQ9UMN6 2715 aaPredicted RBP9.76□□□□□ -0.85
PDGFC-202ENST00000422544 FAM92AA1XBS5 289 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 CCDC172P0C7W6 258 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 SKILP12757 684 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 LAMP2P13473 410 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 FMO1Q01740 532 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 CDR2Q01850 454 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 ZP2Q05996 745 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 GOLGA8FQ08AF8 430 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 GOLGA8DPQ0D2H9 430 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 ADIGQ0VDE8 80 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 MEA1Q16626 185 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 ARHGAP15Q53QZ3 475 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 TMC6Q7Z403 805 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 ZNF677Q86XU0 584 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 MAB21L3Q8N8X9 362 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 TDRD5Q8NAT2 981 aaKnown RBP9.76□□□□□ -0.85
PDGFC-202ENST00000422544 TMEM35BQ8NCS4 154 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 C1orf131Q8NDD1 294 aaKnown RBP9.76□□□□□ -0.85
PDGFC-202ENST00000422544 STK32AQ8WU08 396 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 MRPS31Q92665 395 aaKnown RBP9.76□□□□□ -0.85
PDGFC-202ENST00000422544 ACSF2Q96CM8 615 aaPredicted RBP9.76□□□□□ -0.85
PDGFC-202ENST00000422544 IQCDQ96DY2 449 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 HSFY1Q96LI6 401 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 PCDHB18PQ96TA0 734 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 AGPAT1Q99943 283 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 SLC4A5Q9BY07 1137 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 SLC46A2Q9BY10 475 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 ULBP1Q9BZM6 244 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 MIS12Q9H081 205 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 SLITRK6Q9H5Y7 841 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 HAUS4Q9H6D7 363 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 TASP1Q9H6P5 420 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 TRPC7Q9HCX4 862 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 GDE1Q9NZC3 331 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 PRKAG3Q9UGI9 489 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 LIMD1Q9UGP4 676 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms