RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 FMO5P49326 533 aa23.18■■□□□ 1.3
TRAF4-204ENST00000422344 USP4Q13107 963 aa23.18■■□□□ 1.3
TRAF4-204ENST00000422344 RUNX3Q13761 415 aa23.18■■□□□ 1.3
TRAF4-204ENST00000422344 LRRC32Q14392 662 aa23.18■■□□□ 1.3
TRAF4-204ENST00000422344 ZNF77Q15935 545 aa23.18■■□□□ 1.3
TRAF4-204ENST00000422344 SCAMP5Q8TAC9 235 aa23.18■■□□□ 1.3
TRAF4-204ENST00000422344 WHAMMQ8TF30 809 aa23.18■■□□□ 1.3
TRAF4-204ENST00000422344 TATDN2Q93075 761 aa23.18■■□□□ 1.3
TRAF4-204ENST00000422344 HEXIM2Q96MH2 286 aaKnown RBP23.18■■□□□ 1.3
TRAF4-204ENST00000422344 EBF3Q9H4W6 596 aa23.18■■□□□ 1.3
TRAF4-204ENST00000422344 CSNK1G1Q9HCP0 422 aa23.18■■□□□ 1.3
TRAF4-204ENST00000422344 DUS2Q9NX74 493 aaKnown RBP23.18■■□□□ 1.3
TRAF4-204ENST00000422344 TNFRSF10BO14763 440 aa23.17■■□□□ 1.3
TRAF4-204ENST00000422344 YWHAEP62258 255 aaKnown RBP23.17■■□□□ 1.3
TRAF4-204ENST00000422344 AMPD2Q01433 879 aa23.17■■□□□ 1.3
TRAF4-204ENST00000422344 FZD5Q13467 585 aa23.17■■□□□ 1.3
TRAF4-204ENST00000422344 TRIM68Q6AZZ1 485 aa23.17■■□□□ 1.3
TRAF4-204ENST00000422344 CPA6Q8N4T0 437 aa23.17■■□□□ 1.3
TRAF4-204ENST00000422344 OSCP1Q8WVF1 389 aa23.17■■□□□ 1.3
TRAF4-204ENST00000422344 JAKMIP2Q96AA8 810 aa23.17■■□□□ 1.3
TRAF4-204ENST00000422344 ARID3AQ99856 593 aa23.17■■□□□ 1.3
TRAF4-204ENST00000422344 FBXO44Q9H4M3 255 aa23.17■■□□□ 1.3
TRAF4-204ENST00000422344 LMAN1LQ9HAT1 526 aa23.17■■□□□ 1.3
TRAF4-204ENST00000422344 SMG5Q9UPR3 1016 aaKnown RBP23.17■■□□□ 1.3
TRAF4-204ENST00000422344 ANAPC1Q9H1A4 1944 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 LILRB5O75023 590 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 BEST1O76090 585 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 LRMPQ12912 555 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 CUL2Q13617 745 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 ZMIZ2Q8NF64 920 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 RIN3Q8TB24 985 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 NELL1Q92832 810 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 SECISBP2LQ93073 1101 aaKnown RBP23.16■■□□□ 1.3
TRAF4-204ENST00000422344 TMEM176AQ96HP8 235 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 IER2Q9BTL4 223 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 SRRTQ9BXP5 876 aaKnown RBP23.16■■□□□ 1.3
TRAF4-204ENST00000422344 EPC1Q9H2F5 836 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 HPS4Q9NQG7 708 aa23.16■■□□□ 1.3
TRAF4-204ENST00000422344 CHORDC1Q9UHD1 332 aaPredicted RBP23.16■■□□□ 1.3
TRAF4-204ENST00000422344 TPRP12270 2363 aaKnown RBP23.15■■□□□ 1.3
TRAF4-204ENST00000422344 KIF26AQ9ULI4 1882 aaPredicted RBP23.15■■□□□ 1.3
TRAF4-204ENST00000422344 OAS1P00973 400 aaKnown RBP23.15■■□□□ 1.3
TRAF4-204ENST00000422344 MBL2P11226 248 aaPredicted RBP23.15■■□□□ 1.3
TRAF4-204ENST00000422344 ARSAP15289 507 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 TCF3P15923 654 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 TBXAS1P24557 533 aaPredicted RBP23.15■■□□□ 1.3
TRAF4-204ENST00000422344 SLC7A9P82251 487 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 MTAPQ13126 283 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 PON2Q15165 354 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 HECTD3Q5T447 861 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 CLEC20AQ6ZU45 233 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 ZNF687Q8N1G0 1237 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 GPR161Q8N6U8 529 aaKnown RBP23.15■■□□□ 1.3
TRAF4-204ENST00000422344 ATP2A3Q93084 1043 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 NACA2Q9H009 215 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 CHRDQ9H2X0 955 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 CLSTN2Q9H4D0 955 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 PRMT8Q9NR22 394 aaPredicted RBP23.15■■□□□ 1.3
TRAF4-204ENST00000422344 SMPD4Q9NXE4 827 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 IL37Q9NZH6 218 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 GMIPQ9P107 970 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 CPQQ9Y646 472 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 WNT6Q9Y6F9 365 aa23.15■■□□□ 1.3
TRAF4-204ENST00000422344 LEFTY2O00292 366 aa23.14■■□□□ 1.29
TRAF4-204ENST00000422344 CCDC192P0DO97 292 aa23.14■■□□□ 1.29
TRAF4-204ENST00000422344 DGKKQ5KSL6 1271 aa23.14■■□□□ 1.29
TRAF4-204ENST00000422344 TXNDC11Q6PKC3 985 aa23.14■■□□□ 1.29
TRAF4-204ENST00000422344 DDX42Q86XP3 938 aaKnown RBP eCLIP23.14■■□□□ 1.293e-8■■■□□ 16.5
TRAF4-204ENST00000422344 EXOC4Q96A65 974 aa23.14■■□□□ 1.29
TRAF4-204ENST00000422344 NT5C1BQ96P26 610 aa23.14■■□□□ 1.29
TRAF4-204ENST00000422344 RNF38Q9H0F5 515 aa23.14■■□□□ 1.29
TRAF4-204ENST00000422344 PNPLA8Q9NP80 782 aa23.14■■□□□ 1.29
TRAF4-204ENST00000422344 RWDD2AQ9UIY3 292 aa23.14■■□□□ 1.29
TRAF4-204ENST00000422344 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.14■■□□□ 1.29
TRAF4-204ENST00000422344 MYH10P35580 1976 aa23.13■■□□□ 1.29
TRAF4-204ENST00000422344 P4HA2O15460 535 aa23.13■■□□□ 1.29
TRAF4-204ENST00000422344 OLFM2O95897 454 aa23.13■■□□□ 1.29
TRAF4-204ENST00000422344 CHRNB1P11230 501 aa23.13■■□□□ 1.29
TRAF4-204ENST00000422344 RAD23BP54727 409 aa23.13■■□□□ 1.29
TRAF4-204ENST00000422344 SLC8A3P57103 927 aa23.13■■□□□ 1.29
TRAF4-204ENST00000422344 NR1H3Q13133 447 aa23.13■■□□□ 1.29
TRAF4-204ENST00000422344 PPP1R26Q5T8A7 1209 aaPredicted RBP23.13■■□□□ 1.29
TRAF4-204ENST00000422344 SLC4A11Q8NBS3 891 aa23.13■■□□□ 1.29
TRAF4-204ENST00000422344 DUSP16Q9BY84 665 aa23.13■■□□□ 1.29
TRAF4-204ENST00000422344 TLR8Q9NR97 1041 aaKnown RBP23.13■■□□□ 1.29
TRAF4-204ENST00000422344 HELZP42694 1942 aaKnown RBP23.13■■□□□ 1.29
TRAF4-204ENST00000422344 FAM92AA1XBS5 289 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 PMM2O15305 246 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 ACO1P21399 889 aaKnown RBP23.12■■□□□ 1.29
TRAF4-204ENST00000422344 TUBP50607 506 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 CACNA1BQ00975 2339 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 PPP2R5DQ14738 602 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 SNX30Q5VWJ9 437 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 CREBRFQ8IUR6 639 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 TRIM59Q8IWR1 403 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 MLKLQ8NB16 471 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 GBP4Q96PP9 640 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 NUP62CLQ9H1M0 184 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 ECT2Q9H8V3 914 aa23.12■■□□□ 1.29
TRAF4-204ENST00000422344 CFAP97Q9P2B7 532 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms