RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 C15orf59Q2T9L4 293 aaPredicted RBP9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 SMTNL2Q2TAL5 461 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 DEFB115Q30KQ5 88 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ODF2Q5BJF6 829 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 EFHC1Q5JVL4 640 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 IZUMO3Q5VZ72 239 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 WSCD1Q658N2 575 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 KAZNQ674X7 775 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 MFSD5Q6N075 450 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 TRAF7Q6Q0C0 670 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 STRADAQ7RTN6 431 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 PSTKQ8IV42 348 aaKnown RBP9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ZCCHC9Q8N567 271 aaKnown RBP9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 OR2W6PQ8NHA6 318 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ACTL9Q8TC94 416 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 SLC2A14Q8TDB8 520 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 NT5C3BQ969T7 300 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 RTP4Q96DX8 246 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 UROC1Q96N76 676 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 LPIN3Q9BQK8 851 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ZNF670Q9BS34 389 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 OSBPL7Q9BZF2 842 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ROPN1BQ9BZX4 212 aaPredicted RBP9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ADAM7Q9H2U9 754 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 CDC42EP4Q9H3Q1 356 aaKnown RBP9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 SEMA4AQ9H3S1 761 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ROPN1Q9HAT0 212 aaPredicted RBP9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 PRDM16Q9HAZ2 1276 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 CRTAC1Q9NQ79 661 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 MIOSQ9NXC5 875 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ANAPC5Q9UJX4 755 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 PTCH2Q9Y6C5 1203 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 TTC3P53804 2025 aa9.46□□□□□ -0.89
LINCMD1-201ENST00000418518 M0QZQ0 153 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 FBXO21O94952 628 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 TTC4O95801 387 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 PDGFRBP09619 1106 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 GHRP10912 638 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 TGM2P21980 687 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 IL4RP24394 825 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 ADORA2BP29275 332 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 ACTN2P35609 894 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 ADCY8P40145 1251 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 LMAN1P49257 510 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 SCNN1GP51170 649 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 CDH6P55285 790 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 SLC29A2Q14542 456 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 TAF5Q15542 800 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 TRIP13Q15645 432 aaPredicted RBP9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 KCTD19Q17RG1 926 aaPredicted RBP9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 KRT71Q3SY84 523 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 RAB6CQ53S08 254 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 RAB41Q5JT25 222 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 KCNT1Q5JUK3 1230 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 ZFYVE27Q5T4F4 411 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 RNASEH2BQ5TBB1 312 aaKnown RBP9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 SH3PXD2AQ5TCZ1 1133 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 OTUD1Q5VV17 481 aaPredicted RBP9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 KIAA0319Q5VV43 1072 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 SLC9A4Q6AI14 798 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 CD300LGQ6UXG3 332 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 CLEC20AQ6ZU45 233 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 PAXIP1Q6ZW49 1069 aaPredicted RBP9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 PIGZQ86VD9 579 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 MAP7D3Q8IWC1 876 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 SCML4Q8N228 414 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 SH2D3CQ8N5H7 860 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 ARFGAP2Q8N6H7 521 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 GLIS1Q8NBF1 620 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 KCTD6Q8NC69 237 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 C3orf58Q8NDZ4 430 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 CD99L2Q8TCZ2 262 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 FAM172AQ8WUF8 416 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 LPPQ93052 612 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 PGBD4Q96DM1 585 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 CFAP57Q96MR6 1250 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 RNF157Q96PX1 679 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 SLC2A13Q96QE2 648 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 FAM118BQ9BPY3 351 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 SYT15Q9BQS2 421 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 SNRNP25Q9BV90 132 aaKnown RBP9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 B3GNT5Q9BYG0 378 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 SEZ6LQ9BYH1 1024 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 RAB6CQ9H0N0 254 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 PCDH18Q9HCL0 1135 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 RCOR3Q9P2K3 495 aaPredicted RBP9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 PCSK1NQ9UHG2 260 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 SLC12A6Q9UHW9 1150 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 CDH9Q9ULB4 789 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 ZNF148Q9UQR1 794 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 FARP1Q9Y4F1 1045 aaPredicted RBP9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 FNDC1Q4ZHG4 1894 aaPredicted RBP9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 GREB1Q4ZG55 1949 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 MICAL3Q7RTP6 2002 aa9.46□□□□□ -0.9
LINCMD1-201ENST00000418518 ARHGEF37A1IGU5 675 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 CFAP69A5D8W1 941 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 C9IYK1 514 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 PIK3R2O00459 728 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms