RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 RALGPS2Q86X27 583 aaPredicted RBP21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 EHBP1Q8NDI1 1231 aa21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 PDZD8Q8NEN9 1154 aa21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 OSCP1Q8WVF1 389 aa21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 CNOT6LQ96LI5 555 aaKnown RBP21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 HEXIM2Q96MH2 286 aaKnown RBP21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 SLITRK1Q96PX8 696 aa21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 CCSER2Q9H7U1 834 aa21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 NMUR1Q9HB89 426 aa21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 THG1LQ9NWX6 298 aaKnown RBP21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 SCML2Q9UQR0 700 aa21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 FANCMQ8IYD8 2048 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 LEFTY2O00292 366 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 GREM1O60565 184 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 AFPP02771 609 aaKnown RBP21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 KIF11P52732 1056 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 RUNX3Q13761 415 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 GAB4Q2WGN9 574 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 ITPRIPL2Q3MIP1 535 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 PKDCCQ504Y2 493 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 RAB41Q5JT25 222 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 NAIF1Q69YI7 327 aaPredicted RBP21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 C1orf210Q8IVY1 113 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 KIAA1958Q8N8K9 716 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 CSGALNACT1Q8TDX6 532 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 KREMEN1Q96MU8 473 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 LINC00597Q9H2U6 94 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 NDRG2Q9UN36 371 aaKnown RBP21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 CPQQ9Y646 472 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 WNT6Q9Y6F9 365 aa21.79■■□□□ 1.08
PKNOX1-202ENST00000418336 CYP26A1O43174 497 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 RFX1P22670 979 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 TBXAS1P24557 533 aaPredicted RBP21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 NBL1P41271 181 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 MAGEA9P43362 315 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 ZNF132P52740 706 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 DPY19L2P1Q6NXN4 242 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 BHLHA9Q7RTU4 235 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 SCD5Q86SK9 330 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 TFAP2BQ92481 460 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 WBP2Q969T9 261 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 UBXN6Q9BZV1 441 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 CHRDQ9H2X0 955 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 CNTN6Q9UQ52 1028 aa21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.78■■□□□ 1.08
PKNOX1-202ENST00000418336 PROB1E7EW31 1015 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 TULP2O00295 520 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 GABBR2O75899 941 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 TDGF1P13385 188 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 ERCC5P28715 1186 aaPredicted RBP21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 PDE6CP51160 858 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 KPNA1P52294 538 aaPredicted RBP21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 GCNT1Q02742 428 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 CCINQ13939 588 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 PDGFRLQ15198 375 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 MAMSTRQ6ZN01 415 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 ANKRD52Q8NB46 1076 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 NT5C1BQ96P26 610 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 INTS2Q9H0H0 1204 aaKnown RBP21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 FBXO44Q9H4M3 255 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 FBRSL1Q9HCM7 1045 aaKnown RBP21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 CYLDQ9NQC7 956 aa21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 PRMT8Q9NR22 394 aaPredicted RBP21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 MRPS17Q9Y2R5 130 aaKnown RBP21.77■■□□□ 1.08
PKNOX1-202ENST00000418336 O00370 1275 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 CALCAP01258 141 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 CCDC192P0DO97 292 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 MTAPQ13126 283 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 HECTD3Q5T447 861 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 C1orf228Q6PIY5 440 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 CCDC186Q7Z3E2 898 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 EZH1Q92800 747 aaPredicted RBP21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 NELL1Q92832 810 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 JAKMIP2Q96AA8 810 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 ECT2Q9H8V3 914 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 LMAN1LQ9HAT1 526 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 RBM12Q9NTZ6 932 aaKnown RBP21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 DUS2Q9NX74 493 aaKnown RBP21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 TSPAN16Q9UKR8 245 aa21.76■■□□□ 1.07
PKNOX1-202ENST00000418336 TBX18O95935 607 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 SP9P0CG40 484 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 GJA4P35212 333 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 APBA1Q02410 837 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 PON2Q15165 354 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 TMEM196Q5HYL7 178 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 MIIPQ5JXC2 388 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 FSTL4Q6MZW2 842 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 RRAGAQ7L523 313 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 PIGZQ86VD9 579 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 ATOH1Q92858 354 aaPredicted RBP21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 GBP4Q96PP9 640 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 IRF2BPLQ9H1B7 796 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 THAP9Q9H5L6 903 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 C2orf42Q9NWW7 574 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 SMPD4Q9NXE4 827 aa21.75■■□□□ 1.07
PKNOX1-202ENST00000418336 A0A1W2PQH9 124 aa21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 TRDMT1O14717 391 aaKnown RBP21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 FGFR1OPO95684 399 aaKnown RBP21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 ABL1P00519 1130 aa21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 PAEPP09466 180 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms