RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 THAP11Q96EK4 314 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 USP42Q9H9J4 1324 aaKnown RBP11.59□□□□□ -0.55
PTCH1-205ENST00000418258 NFICP08651 508 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 YWHAQP27348 245 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 PTGISQ16647 500 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 CCDC81Q6ZN84 652 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 MTSS1LQ765P7 747 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 PPCSQ9HAB8 311 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 TUBGCP3Q96CW5 907 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 NLNQ9BYT8 704 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 RERGLQ9H628 205 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 PXMP2Q9NR77 195 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 AGPAT3Q9NRZ7 376 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 AKAP7Q9P0M2 348 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-205ENST00000418258 TRIM10Q9UDY6 481 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 SPATA31A5Q5VU36 1347 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 SPATA31A7Q8IWB4 1347 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 CNTNAP5Q8WYK1 1306 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 MSH4O15457 936 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 PYGMP11217 842 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 ACOX1Q15067 660 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 BARGINQ6ZT62 677 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 SLC20A1Q8WUM9 679 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 STAMBPL1Q96FJ0 436 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 YIPF3Q9GZM5 350 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 EPC1Q9H2F5 836 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 WDR41Q9HAD4 459 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 TRIM17Q9Y577 477 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 ZC3H13Q5T200 1668 aaKnown RBP11.58□□□□□ -0.55
PTCH1-205ENST00000418258 UNC13BO14795 1591 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 GPR75-ASB3A0A0A6YYF3 556 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 MAGEA9P43362 315 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 KCNJ1P48048 391 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 TGFB2P61812 414 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 YWHAZP63104 245 aaKnown RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 GSTA3Q16772 222 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 DENND1BQ6P3S1 775 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 CACUL1Q86Y37 369 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 ADSSL1Q8N142 457 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 ALDH8A1Q9H2A2 487 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 RMND5AQ9H871 391 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 MANSC1Q9H8J5 431 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 RABL6Q3YEC7 729 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 FNDC3BQ53EP0 1204 aaKnown RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 BOLA3Q53S33 107 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 FAM171A1Q5VUB5 890 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 RGL4Q8IZJ4 473 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 CENPLQ8N0S6 344 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 DNAJB3Q8WWF6 145 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 USP18Q9UMW8 372 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 hCG_2014768A0A024R1R8 64 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 SSU72P8A0A1W2PR75 194 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 DEAF1O75398 565 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 WBP4O75554 376 aaKnown RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 CCDC144BQ3MJ40 725 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 CLYBLQ8N0X4 340 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 RIN3Q8TB24 985 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 ZNF512BQ96KM6 892 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 SETD4Q9NVD3 440 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 H0YC42 278 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 GEMIN4P57678 1058 aaKnown RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 FMR1Q06787 632 aaKnown RBP eCLIP11.58□□□□□ -0.562e-7■■■■■ 26.8
PTCH1-205ENST00000418258 LY6KQ17RY6 165 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 PGLYRP2Q96PD5 576 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 KLF6Q99612 283 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 SENP6Q9GZR1 1112 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 SMARCAL1Q9NZC9 954 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 TRPC4Q9UBN4 977 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 MTO1Q9Y2Z2 717 aaKnown RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 CNTNAP4Q9C0A0 1308 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 NTSR2O95665 410 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 CENPCQ03188 943 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 CEP78Q5JTW2 689 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 LUZP2Q86TE4 346 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 ATXN3LQ9H3M9 355 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 PTPAQ15257 358 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 DDX42Q86XP3 938 aaKnown RBP eCLIP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 RUSC1Q9BVN2 902 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 UBE2OQ9C0C9 1292 aaKnown RBP11.58□□□□□ -0.56
PTCH1-205ENST00000418258 ALG6Q9Y672 507 aa11.58□□□□□ -0.56
PTCH1-205ENST00000418258 A0A087WZ62 844 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 USP27XA6NNY8 438 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 PSTPIP1O43586 416 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 F9P00740 461 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 SCNN1BP51168 640 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 ACTN3Q08043 901 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 PPM1LQ5SGD2 360 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 LRRC8DQ7L1W4 858 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 COMMD2Q86X83 199 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 SYTL1Q8IYJ3 562 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 ACER1Q8TDN7 264 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 SPIRE2Q8WWL2 714 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 CCDC126Q96EE4 140 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 XPO6Q96QU8 1125 aaKnown RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 CELF4Q9BZC1 486 aaKnown RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 ILKAPQ9H0C8 392 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 FBXO44Q9H4M3 255 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 PPIEQ9UNP9 301 aaKnown RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 CPSF4O95639 269 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms