RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 PTPN18Q99952 460 aa6.61□□□□□ -1.35
NIFKP3-201ENST00000417799 RAVER2Q9HCJ3 691 aaKnown RBP6.61□□□□□ -1.35
NIFKP3-201ENST00000417799 C6orf50Q9HD87 102 aa6.61□□□□□ -1.35
NIFKP3-201ENST00000417799 ANLNQ9NQW6 1124 aa6.61□□□□□ -1.35
NIFKP3-201ENST00000417799 GJB4Q9NTQ9 266 aa6.61□□□□□ -1.35
NIFKP3-201ENST00000417799 RBM12Q9NTZ6 932 aaKnown RBP6.61□□□□□ -1.35
NIFKP3-201ENST00000417799 ADAM29Q9UKF5 820 aa6.61□□□□□ -1.35
NIFKP3-201ENST00000417799 PNMA2Q9UL42 364 aa6.61□□□□□ -1.35
NIFKP3-201ENST00000417799 INTUQ9ULD6 942 aa6.61□□□□□ -1.35
NIFKP3-201ENST00000417799 ABCB11O95342 1321 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 RPTORQ8N122 1335 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 ESYT2A0FGR8 921 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 BTBD18B2RXH4 712 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 AP1G1O43747 822 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 NUAK1O60285 661 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 TMEM127O75204 238 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 LTA4HP09960 611 aaKnown RBP6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 ZNF888P0CJ79 500 aaPredicted RBP6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 CTSSP25774 331 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 U2AF2P26368 475 aaKnown RBP eCLIP6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 GNA11P29992 359 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 KRT2P35908 639 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 WASP42768 502 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 TM4SF4P48230 202 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 PPP3CAQ08209 521 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 SREBF2Q12772 1141 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 NOMO1Q15155 1222 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 NPY5RQ15761 445 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 USH1GQ495M9 461 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 GPR155Q7Z3F1 870 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 CLEC14AQ86T13 490 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 DIS3L2Q8IYB7 885 aaKnown RBP6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 CPXCR1Q8N123 301 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 TP53I13Q8NBR0 393 aaPredicted RBP6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 BICD2Q8TD16 824 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 LCORQ96JN0 433 aaPredicted RBP6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 CAPNS2Q96L46 248 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 GTPBP4Q9BZE4 634 aaKnown RBP6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 ZMYND12Q9H0C1 365 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 GLT8D2Q9H1C3 349 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 FOXP1Q9H334 677 aaPredicted RBP6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 ZSCAN16Q9H4T2 348 aaPredicted RBP6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 PSTPIP2Q9H939 334 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 ZCCHC17Q9NP64 241 aaKnown RBP6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 RIC8AQ9NPQ8 531 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 CCPG1Q9ULG6 757 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 PTPN22Q9Y2R2 807 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 MRPL11Q9Y3B7 192 aaKnown RBP6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 PTPRFP10586 1907 aa6.6□□□□□ -1.35
NIFKP3-201ENST00000417799 LOC285556D6RIA3 1793 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 CCDC154A6NI56 674 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 VSTM5A8MXK1 200 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 KIF28PB7ZC32 967 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 HTRA2O43464 458 aaPredicted RBP6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 AKR1B10O60218 316 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 PRAMEF4O60810 478 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 CNMDO75829 334 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 ALAS1P13196 640 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 GCLCP48506 637 aaPredicted RBP6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 ADCY7P51828 1080 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 MRPL12P52815 198 aaKnown RBP6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 TBX4P57082 545 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 RESTQ13127 1097 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 NOGQ13253 232 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 GRM1Q13255 1194 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 FZD5Q13467 585 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 PLS1Q14651 629 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 ZMAT1Q5H9K5 638 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 TCERG1LQ5VWI1 586 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 SNRNP48Q6IEG0 339 aaKnown RBP6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 LILRA6Q6PI73 481 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 ABHD15Q6UXT9 468 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 USP45Q70EL2 814 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 TAS1R1Q7RTX1 841 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 ZNF761Q86XN6 746 aaPredicted RBP6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 BLIDQ8IZY5 108 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 PLA2G15Q8NCC3 412 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 SLC35G2Q8TBE7 412 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 SMCR8Q8TEV9 937 aaPredicted RBP6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 SNX33Q8WV41 574 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 GCDHQ92947 438 aaPredicted RBP6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 CUL5Q93034 780 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 LPPQ93052 612 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 PARK7Q99497 189 aaKnown RBP6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 PAGR1Q9BTK6 254 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 TEX13BQ9BXU2 312 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 OR10A2Q9H208 303 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 PCDHA6Q9UN73 950 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 RABGAP1Q9Y3P9 1069 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 IPPQ9Y573 584 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 ATP6V1DQ9Y5K8 247 aa6.59□□□□□ -1.35
NIFKP3-201ENST00000417799 RLFQ13129 1914 aa6.58□□□□□ -1.36
NIFKP3-201ENST00000417799 C2orf78A6NCI8 922 aa6.58□□□□□ -1.36
NIFKP3-201ENST00000417799 GCOM1H8Y6P7 765 aaPredicted RBP6.58□□□□□ -1.36
NIFKP3-201ENST00000417799 MEIS2O14770 477 aa6.58□□□□□ -1.36
NIFKP3-201ENST00000417799 ADAMTS3O15072 1205 aa6.58□□□□□ -1.36
NIFKP3-201ENST00000417799 PHF2O75151 1096 aa6.58□□□□□ -1.36
NIFKP3-201ENST00000417799 SLC25A27O95847 323 aa6.58□□□□□ -1.36
NIFKP3-201ENST00000417799 POLR2MP0CAP2 368 aa6.58□□□□□ -1.36
NIFKP3-201ENST00000417799 EDNRBP24530 442 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms