RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 UGT1A8Q9HAW9 530 aa15.11■□□□□ 0.01
HDAC9-208ENST00000417496 ARMCX1Q9P291 453 aa15.11■□□□□ 0.01
HDAC9-208ENST00000417496 TEX264Q9Y6I9 313 aa15.11■□□□□ 0.01
HDAC9-208ENST00000417496 E5RJQ4 531 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 TM9SF1O15321 606 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 KCNN4O15554 427 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 CILPO75339 1184 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 INHBAP08476 426 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 STAG3L1P0CL83 205 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 TPBGLP0DKB5 382 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 GNAZP19086 355 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 CYP3A5P20815 502 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 CRYMQ14894 314 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 TAF11Q15544 211 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 OR6B2Q6IFH4 312 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 DSTYKQ6XUX3 929 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 PPM1NQ8N819 430 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 SPATA33Q96N06 139 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 CADM1Q9BY67 442 aaKnown RBP15.1■□□□□ 0.01
HDAC9-208ENST00000417496 VPS11Q9H270 941 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 RNPEPQ9H4A4 650 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 SSU72Q9NP77 194 aaKnown RBP15.1■□□□□ 0.01
HDAC9-208ENST00000417496 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.1■□□□□ 0.01
HDAC9-208ENST00000417496 DOCK1Q14185 1865 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 FAM237BA0A1B0GVD1 139 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 PTPN4P29074 926 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 ETV4P43268 484 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 SESN3P58005 492 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 MBTD1Q05BQ5 628 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 VGLL4Q14135 290 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 SURF1Q15526 300 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 KHDC1Q4VXA5 237 aaKnown RBP15.1■□□□□ 0.01
HDAC9-208ENST00000417496 SH2D5Q6ZV89 423 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 FBXO16Q8IX29 292 aaPredicted RBP15.1■□□□□ 0.01
HDAC9-208ENST00000417496 MAB21L3Q8N8X9 362 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 STK32AQ8WU08 396 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 MCRS1Q96EZ8 462 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 TMEM120AQ9BXJ8 343 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 TRIM55Q9BYV6 548 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 SLC13A1Q9BZW2 595 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 SPATC1LQ9H0A9 340 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 RSAD1Q9HA92 442 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 USP29Q9HBJ7 922 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 FETUBQ9UGM5 382 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 NR2E3Q9Y5X4 410 aa15.1■□□□□ 0.01
HDAC9-208ENST00000417496 IGKV6-21A0A0C4DH24 114 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 HMGCRP04035 888 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 APRTP07741 180 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 RBL1P28749 1068 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 ABL2P42684 1182 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 ARFIP2P53365 341 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 BMPR2Q13873 1038 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 KCNJ11Q14654 390 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 GJC2Q5T442 439 aaPredicted RBP15.09■□□□□ 0.01
HDAC9-208ENST00000417496 SLC44A1Q8WWI5 657 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 SIP14410 1827 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 F5H423 210 aaPredicted RBP15.09■□□□□ 0.01
HDAC9-208ENST00000417496 SOCS7O14512 581 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 CYB561D2O14569 222 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 DLDP09622 509 aaKnown RBP15.09■□□□□ 0.01
HDAC9-208ENST00000417496 IL4RP24394 825 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 ERFP50548 548 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 RASSF2P50749 326 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 ZNF143P52747 638 aaPredicted RBP15.09■□□□□ 0.01
HDAC9-208ENST00000417496 NDST1P52848 882 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 SLC8A3P57103 927 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 ZBTB16Q05516 673 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 NOMO1Q15155 1222 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 CA9Q16790 459 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 GADL1Q6ZQY3 521 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 FAM183BPQ6ZVS7 135 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 APBB1IPQ7Z5R6 666 aaPredicted RBP15.09■□□□□ 0.01
HDAC9-208ENST00000417496 CXorf38Q8TB03 319 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 PLAC1Q9HBJ0 212 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 NGRNQ9NPE2 291 aaKnown RBP15.09■□□□□ 0.01
HDAC9-208ENST00000417496 PDGFCQ9NRA1 345 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 RNF19AQ9NV58 838 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 ASNSD1Q9NWL6 643 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 DONSONQ9NYP3 566 aa15.09■□□□□ 0.01
HDAC9-208ENST00000417496 IQANK1A0A1B0GTG1 560 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 TRIM49D1C9J1S8 452 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 USP2O75604 605 aaPredicted RBP15.08■□□□□ 0.01
HDAC9-208ENST00000417496 TOP3BO95985 862 aaKnown RBP15.08■□□□□ 0.01
HDAC9-208ENST00000417496 TGFB3P10600 412 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 CPA2P48052 419 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 NEK3P51956 506 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 CES4AQ5XG92 561 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 RFX8Q6ZV50 586 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 RIOX2Q8IUF8 465 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 SCUBE3Q8IX30 993 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 PLD5Q8N7P1 536 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 CCDC110Q8TBZ0 833 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.08■□□□□ 0.01
HDAC9-208ENST00000417496 HPDLQ96IR7 371 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 CXCL16Q9H2A7 254 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 IFT122Q9HBG6 1241 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 WDR35Q9P2L0 1181 aa15.08■□□□□ 0.01
HDAC9-208ENST00000417496 TNS1Q9HBL0 1735 aaKnown RBP15.08■□□□□ 0
HDAC9-208ENST00000417496 CCDC195A0A1B0GUA6 201 aa15.08■□□□□ 0
HDAC9-208ENST00000417496 C2CD4BA6NLJ0 364 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms