RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 MBL2P11226 248 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-204ENST00000417122 GJA4P35212 333 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 CCINQ13939 588 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 GAS6Q14393 721 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 PPP2R5DQ14738 602 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 CAMK4Q16566 473 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 EML3Q32P44 896 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 PPP1R26Q5T8A7 1209 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-204ENST00000417122 FOXR2Q6PJQ5 311 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 TSSK4Q6SA08 328 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 JAKMIP2Q96AA8 810 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 CHFRQ96EP1 664 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 HEXIM2Q96MH2 286 aaKnown RBP16.53■□□□□ 0.24
ITGB1-204ENST00000417122 ARID3AQ99856 593 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 LINC00597Q9H2U6 94 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 FBXO44Q9H4M3 255 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 SMPD4Q9NXE4 827 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 GMIPQ9P107 970 aa16.53■□□□□ 0.24
ITGB1-204ENST00000417122 HHLA1C9JL84 531 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 TRDMT1O14717 391 aaKnown RBP16.52■□□□□ 0.24
ITGB1-204ENST00000417122 COCHO43405 550 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 ZDHHC11BP0C7U3 371 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 FMO5P49326 533 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 CCR3P51677 355 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 STX17P56962 302 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 NR1H3Q13133 447 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 PAK1Q13153 545 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 TMEM196Q5HYL7 178 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 HECTD3Q5T447 861 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 SYNPOQ8N3V7 929 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 SPEM1Q8N4L4 309 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 KIAA1958Q8N8K9 716 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 TRIML1Q8N9V2 468 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 SLC4A11Q8NBS3 891 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 TMEM176AQ96HP8 235 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 PNPLA8Q9NP80 782 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 KIAA1468Q9P260 1216 aa16.52■□□□□ 0.24
ITGB1-204ENST00000417122 MYO15AQ9UKN7 3530 aa16.52■□□□□ 0.23
ITGB1-204ENST00000417122 NFATC1O95644 943 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 CXCL12P48061 93 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 TUBP50607 506 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 GALK1P51570 392 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 RAD23BP54727 409 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 GRSF1Q12849 480 aaKnown RBP eCLIP16.51■□□□□ 0.23
ITGB1-204ENST00000417122 CUL2Q13617 745 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 FSTL4Q6MZW2 842 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 Q6ZS52 159 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 GPRIN1Q7Z2K8 1008 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 DDX42Q86XP3 938 aaKnown RBP eCLIP16.51■□□□□ 0.23
ITGB1-204ENST00000417122 NELL1Q92832 810 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 EXOC4Q96A65 974 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 DUSP16Q9BY84 665 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 CCSER2Q9H7U1 834 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 TLR8Q9NR97 1041 aaKnown RBP16.51■□□□□ 0.23
ITGB1-204ENST00000417122 ZSCAN32Q9NX65 697 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 PCDHGA2Q9Y5H1 932 aa16.51■□□□□ 0.23
ITGB1-204ENST00000417122 PMM2O15305 246 aa16.5■□□□□ 0.23
ITGB1-204ENST00000417122 LMNAP02545 664 aaKnown RBP16.5■□□□□ 0.23
ITGB1-204ENST00000417122 TDGF1P13385 188 aa16.5■□□□□ 0.23
ITGB1-204ENST00000417122 ACO1P21399 889 aaKnown RBP16.5■□□□□ 0.23
ITGB1-204ENST00000417122 YWHAEP62258 255 aaKnown RBP16.5■□□□□ 0.23
ITGB1-204ENST00000417122 SATB1Q01826 763 aa16.5■□□□□ 0.23
ITGB1-204ENST00000417122 LRMPQ12912 555 aa16.5■□□□□ 0.23
ITGB1-204ENST00000417122 ZBTB44Q8NCP5 570 aa16.5■□□□□ 0.23
ITGB1-204ENST00000417122 ATRIPQ8WXE1 791 aa16.5■□□□□ 0.23
ITGB1-204ENST00000417122 CD101Q93033 1021 aa16.5■□□□□ 0.23
ITGB1-204ENST00000417122 P2RY13Q9BPV8 354 aa16.5■□□□□ 0.23
ITGB1-204ENST00000417122 SRRTQ9BXP5 876 aaKnown RBP16.5■□□□□ 0.23
ITGB1-204ENST00000417122 FAM126AQ9BYI3 521 aaPredicted RBP16.5■□□□□ 0.23
ITGB1-204ENST00000417122 CFAP97Q9P2B7 532 aa16.5■□□□□ 0.23
ITGB1-204ENST00000417122 SCML2Q9UQR0 700 aa16.5■□□□□ 0.23
ITGB1-204ENST00000417122 DMDP11532 3685 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 SLC9A3R1O14745 358 aaPredicted RBP16.49■□□□□ 0.23
ITGB1-204ENST00000417122 GNA14O95837 355 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 EGFP01133 1207 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 DRD1P21728 446 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 TBXAS1P24557 533 aaPredicted RBP16.49■□□□□ 0.23
ITGB1-204ENST00000417122 PGFP49763 221 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 NRLP54845 237 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 CETN1Q12798 172 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 ARHGAP17Q68EM7 881 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 NAIF1Q69YI7 327 aaPredicted RBP16.49■□□□□ 0.23
ITGB1-204ENST00000417122 USP34Q70CQ2 3546 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 ADGRG2Q8IZP9 1017 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 ZFRQ96KR1 1074 aaKnown RBP16.49■□□□□ 0.23
ITGB1-204ENST00000417122 NT5C1BQ96P26 610 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 NACA2Q9H009 215 aa16.49■□□□□ 0.23
ITGB1-204ENST00000417122 FBRSL1Q9HCM7 1045 aaKnown RBP16.49■□□□□ 0.23
ITGB1-204ENST00000417122 E2F8A0AVK6 867 aa16.48■□□□□ 0.23
ITGB1-204ENST00000417122 SCAMP3O14828 347 aaKnown RBP16.48■□□□□ 0.23
ITGB1-204ENST00000417122 P4HA2O15460 535 aa16.48■□□□□ 0.23
ITGB1-204ENST00000417122 CYP26A1O43174 497 aa16.48■□□□□ 0.23
ITGB1-204ENST00000417122 TLR5O60602 858 aa16.48■□□□□ 0.23
ITGB1-204ENST00000417122 FGFR1OPO95684 399 aaKnown RBP16.48■□□□□ 0.23
ITGB1-204ENST00000417122 KIF11P52732 1056 aa16.48■□□□□ 0.23
ITGB1-204ENST00000417122 MARSP56192 900 aaKnown RBP16.48■□□□□ 0.23
ITGB1-204ENST00000417122 KCNH2Q12809 1159 aa16.48■□□□□ 0.23
ITGB1-204ENST00000417122 TRIM59Q8IWR1 403 aa16.48■□□□□ 0.23
ITGB1-204ENST00000417122 UBR7Q8N806 425 aa16.48■□□□□ 0.23
ITGB1-204ENST00000417122 OSER1Q9NX31 292 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms