RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 CEP135Q66GS9 1140 aa23.12■■□□□ 1.29
ACTB-203ENST00000417101 DDX42Q86XP3 938 aaKnown RBP eCLIP23.12■■□□□ 1.293e-24■□□□□ 9.6
ACTB-203ENST00000417101 FUKQ8N0W3 1084 aa23.12■■□□□ 1.29
ACTB-203ENST00000417101 C12orf50Q8NA57 414 aaPredicted RBP23.12■■□□□ 1.29
ACTB-203ENST00000417101 TSTD1Q8NFU3 115 aa23.12■■□□□ 1.29
ACTB-203ENST00000417101 TMC2Q8TDI7 906 aa23.12■■□□□ 1.29
ACTB-203ENST00000417101 SMARCD1Q96GM5 515 aa23.12■■□□□ 1.29
ACTB-203ENST00000417101 KRT82Q9NSB4 513 aa23.12■■□□□ 1.29
ACTB-203ENST00000417101 EBF1Q9UH73 591 aa23.12■■□□□ 1.29
ACTB-203ENST00000417101 HPSEQ9Y251 543 aa23.12■■□□□ 1.29
ACTB-203ENST00000417101 TPRP12270 2363 aaKnown RBP23.12■■□□□ 1.29
ACTB-203ENST00000417101 DCLK1O15075 740 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 COCHO43405 550 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 RPN1P04843 607 aaKnown RBP23.11■■□□□ 1.29
ACTB-203ENST00000417101 MYL1P05976 194 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 ZNF806P0C7X5 589 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 CCDC130P13994 396 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 SLC6A11P48066 632 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 HECTD3Q5T447 861 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 RHBDF2Q6PJF5 856 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 SV2AQ7L0J3 742 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 DUSP15Q9H1R2 295 aaPredicted RBP23.11■■□□□ 1.29
ACTB-203ENST00000417101 IL37Q9NZH6 218 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 FRMD4BQ9Y2L6 1034 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 LAMA1P25391 3075 aa23.11■■□□□ 1.29
ACTB-203ENST00000417101 ADH1CP00326 375 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 NDST1P52848 882 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 MESP2Q0VG99 397 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 ELF2Q15723 593 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 PPM1JQ5JR12 505 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 SPOPLQ6IQ16 392 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 SFTPA1Q8IWL2 248 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 CCDC33Q8N5R6 958 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 SLC2A14Q8TDB8 520 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 TAF4BQ92750 862 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 ZFRQ96KR1 1074 aaKnown RBP23.1■■□□□ 1.29
ACTB-203ENST00000417101 PNKPQ96T60 521 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 SMOC1Q9H4F8 434 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 CCSER2Q9H7U1 834 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.1■■□□□ 1.292e-9■■■■□ 25.3
ACTB-203ENST00000417101 GMIPQ9P107 970 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 TBC1D14Q9P2M4 693 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 HMGXB4Q9UGU5 601 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 PCDHGA5Q9Y5G8 931 aa23.1■■□□□ 1.29
ACTB-203ENST00000417101 EML5Q05BV3 1969 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 E2F8A0AVK6 867 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 IKBKBO14920 756 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 CALUO43852 315 aaPredicted RBP23.09■■□□□ 1.29
ACTB-203ENST00000417101 ASS1P00966 412 aaKnown RBP23.09■■□□□ 1.29
ACTB-203ENST00000417101 MPLP40238 635 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 PIK3CAP42336 1068 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 SYKP43405 635 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 KRT85P78386 507 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 PLA2G2CQ5R387 149 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 C1orf220Q5T0J3 134 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 SNX30Q5VWJ9 437 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 C12orf29Q8N999 325 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 SMOQ99835 787 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 TPSD1Q9BZJ3 242 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 RXFP3Q9NSD7 469 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 FAM49BQ9NUQ9 324 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 MMP17Q9ULZ9 603 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 INVSQ9Y283 1065 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 ZDHHC9Q9Y397 364 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 MYO16Q9Y6X6 1858 aa23.09■■□□□ 1.29
ACTB-203ENST00000417101 BEST1O76090 585 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 HLA-DRAP01903 254 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 PRR29P0C7W0 189 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 ADH5P11766 374 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 GBP1P32455 592 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 ASPAP45381 313 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 NDUFA8P51970 172 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 LY6G5CQ5SRR4 150 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 IL31Q6EBC2 164 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 ANO7Q6IWH7 933 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 UNC93AQ86WB7 457 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 C12orf40Q86WS4 652 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 CRYBG2Q8N1P7 616 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 ZMIZ2Q8NF64 920 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 COMMD8Q9NX08 183 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 TRAF3IP3Q9Y228 551 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 SH3BP1Q9Y3L3 701 aa23.08■■□□□ 1.29
ACTB-203ENST00000417101 CNOT1A5YKK6 2376 aaKnown RBP23.08■■□□□ 1.29
ACTB-203ENST00000417101 KIAA1549LQ6ZVL6 1849 aa23.08■■□□□ 1.28
ACTB-203ENST00000417101 FAM92AA1XBS5 289 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 RHOBTB1O94844 696 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 KIF20AO95235 890 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 KAT7O95251 611 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 APODP05090 189 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 ZDHHC11BP0C7U3 371 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 EIF2DP41214 584 aaKnown RBP23.07■■□□□ 1.28
ACTB-203ENST00000417101 TUBP50607 506 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 VAMP7P51809 220 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 MAP3K7CLP57077 242 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 MRPS21P82921 87 aaKnown RBP23.07■■□□□ 1.28
ACTB-203ENST00000417101 TTC30AQ86WT1 665 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 CCDC47Q96A33 483 aaKnown RBP23.07■■□□□ 1.28
ACTB-203ENST00000417101 NACA2Q9H009 215 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 ARHGEF4Q9NR80 690 aa23.07■■□□□ 1.28
ACTB-203ENST00000417101 VPS45Q9NRW7 570 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms