RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 CDX2Q99626 313 aaPredicted RBP8.5□□□□□ -1.05
MDC1-203ENST00000417033 MIS12Q9H081 205 aa8.5□□□□□ -1.05
MDC1-203ENST00000417033 THAP2Q9H0W7 228 aa8.5□□□□□ -1.05
MDC1-203ENST00000417033 HCFC1R1Q9NWW0 138 aa8.5□□□□□ -1.05
MDC1-203ENST00000417033 TRIM10Q9UDY6 481 aa8.5□□□□□ -1.05
MDC1-203ENST00000417033 EPN1Q9Y6I3 576 aaPredicted RBP8.5□□□□□ -1.05
MDC1-203ENST00000417033 PATJQ8NI35 1801 aa8.5□□□□□ -1.05
MDC1-203ENST00000417033 TCRBV5S1A1TA0A578 114 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 EIF3CLB5ME19 914 aaKnown RBP8.49□□□□□ -1.05
MDC1-203ENST00000417033 GOLGA8SH3BPF8 625 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 TRIM66O15016 1216 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 TBX10O75333 385 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 TADA3O75528 432 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 GRAP2O75791 330 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 USP17L7P0C7H9 530 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 HMGA1P17096 107 aaKnown RBP8.49□□□□□ -1.05
MDC1-203ENST00000417033 COL9A1P20849 921 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 ANXA13P27216 316 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 DEKP35659 375 aaKnown RBP8.49□□□□□ -1.05
MDC1-203ENST00000417033 CYLC1P35663 651 aaPredicted RBP8.49□□□□□ -1.05
MDC1-203ENST00000417033 NSFP46459 744 aaKnown RBP8.49□□□□□ -1.05
MDC1-203ENST00000417033 RPL34P49207 117 aaKnown RBP8.49□□□□□ -1.05
MDC1-203ENST00000417033 GALCP54803 685 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 RPL10AP62906 217 aaKnown RBP8.49□□□□□ -1.05
MDC1-203ENST00000417033 SMARCB1Q12824 385 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 RAB41Q5JT25 222 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 PPM1LQ5SGD2 360 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 LIN9Q5TKA1 542 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 OR6B2Q6IFH4 312 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 TRNP1Q6NT89 227 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 OLFML1Q6UWY5 402 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 ERICH1Q86X53 443 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 XYLT1Q86Y38 959 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 PHF13Q86YI8 300 aaPredicted RBP8.49□□□□□ -1.05
MDC1-203ENST00000417033 CPNE8Q86YQ8 564 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 TMC8Q8IU68 726 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 CCDC170Q8IYT3 715 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 CCDC112Q8NEF3 446 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 KCTD13Q8WZ19 329 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 ZNF707Q96C28 371 aaPredicted RBP8.49□□□□□ -1.05
MDC1-203ENST00000417033 ZNF653Q96CK0 615 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 EIF3CQ99613 913 aaKnown RBP8.49□□□□□ -1.05
MDC1-203ENST00000417033 TRIM7Q9C029 511 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 DNAI2Q9GZS0 605 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 LACRTQ9GZZ8 138 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 ISCUQ9H1K1 167 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 NMUR1Q9HB89 426 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 LRRC4Q9HBW1 653 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 OSER1Q9NX31 292 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 ADAM22Q9P0K1 906 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 GMIPQ9P107 970 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 MYO1AQ9UBC5 1043 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 MAGED2Q9UNF1 606 aaPredicted RBP8.49□□□□□ -1.05
MDC1-203ENST00000417033 CEP83Q9Y592 693 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 ADGRG1Q9Y653 693 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 MYH10P35580 1976 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 DOCK6Q96HP0 2047 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 NCANO14594 1321 aa8.49□□□□□ -1.05
MDC1-203ENST00000417033 USP27XA6NNY8 438 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 YJEFN3A6XGL0 299 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 E7ENQ6 273 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 ARHGAP6O43182 974 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 RTN2O75298 545 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 LCA5LO95447 670 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 GZMAP12544 262 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 GJA1P17302 382 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 CCR2P41597 374 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 MAGEA1P43355 309 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 TUFMP49411 452 aaKnown RBP8.48□□□□□ -1.05
MDC1-203ENST00000417033 DAOAP59103 153 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 PITX1P78337 314 aaPredicted RBP8.48□□□□□ -1.05
MDC1-203ENST00000417033 CCDC85BQ15834 202 aaPredicted RBP8.48□□□□□ -1.05
MDC1-203ENST00000417033 RAB6CQ53S08 254 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 RARS2Q5T160 578 aaKnown RBP8.48□□□□□ -1.05
MDC1-203ENST00000417033 SYCE2Q6PIF2 218 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 TMC5Q6UXY8 1006 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 EP400NLQ6ZTU2 488 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 CCDC149Q6ZUS6 474 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 DENND5BQ6ZUT9 1274 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 DNAJB7Q7Z6W7 309 aaPredicted RBP8.48□□□□□ -1.05
MDC1-203ENST00000417033 SCD5Q86SK9 330 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 TMEM150AQ86TG1 271 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 TMEM110Q86TL2 294 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 VPS36Q86VN1 386 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 SCUBE3Q8IX30 993 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 NUP93Q8N1F7 819 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 SIX6OS1Q8N1H7 587 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 DEFB123Q8N688 67 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 EMC1Q8N766 993 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 EFHBQ8N7U6 833 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 JOSD2Q8TAC2 188 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 IPO4Q8TEX9 1081 aaKnown RBP8.48□□□□□ -1.05
MDC1-203ENST00000417033 STK32AQ8WU08 396 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 TCEAL4Q96EI5 215 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 SPATA17Q96L03 361 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 HSFY1Q96LI6 401 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 LRRC3Q9BY71 257 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 RAB6CQ9H0N0 254 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 SYNCQ9H7C4 482 aa8.48□□□□□ -1.05
MDC1-203ENST00000417033 IL21Q9HBE4 155 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms