RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 ISCUQ9H1K1 167 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 RIBC2Q9H4K1 309 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 IGFLR1Q9H665 355 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 XKR8Q9H6D3 395 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 DNAJC18Q9H819 358 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 IPPKQ9H8X2 491 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 BRF2Q9HAW0 419 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 GLRX2Q9NS18 164 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 PNPOQ9NVS9 261 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 GDAP2Q9NXN4 497 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 UBAP1Q9NZ09 502 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 HSPBP1Q9NZL4 362 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 RGL1Q9NZL6 768 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 EHD2Q9NZN4 543 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 COL20A1Q9P218 1284 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 DPP7Q9UHL4 492 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 CPA4Q9UI42 421 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 PSME2Q9UL46 239 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 BARX2Q9UMQ3 279 aaPredicted RBP3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 CLEC4AQ9UMR7 237 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 SOX13Q9UN79 622 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 SCAF8Q9UPN6 1271 aaKnown RBP3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 NAALADL1Q9UQQ1 740 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 MTO1Q9Y2Z2 717 aaKnown RBP3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 PCDHGA1Q9Y5H4 931 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 CLDN16Q9Y5I7 305 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 ST14Q9Y5Y6 855 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 HS3ST4Q9Y661 456 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 SLC4A4Q9Y6R1 1079 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 FPGT-TNNI3KV9GXZ4 949 aa3.31□□□□□ -1.88
CTDSPL-203ENST00000416688 IGSF1Q8N6C5 1336 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 WDR19Q8NEZ3 1342 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 ST20-MTHFSA0A0A6YYL1 179 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 LOC100653049A0A140TA62 436 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 A4D1N5 150 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 GLOD5A6NK44 160 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 VGLL3A8MV65 326 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 TMEM232C9JQI7 657 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 F8VZ95 297 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 DNM1LO00429 736 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 SHOXO15266 292 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 FANCGO15287 622 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 TP73O15350 636 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 RANBP6O60518 1105 aaKnown RBP3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 KRT34O76011 436 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 WFS1O76024 890 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 CAMTA2O94983 1202 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 ADAMTS2O95450 1211 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 NDST3O95803 873 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 NPPAP01160 153 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 FYNP06241 537 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 THBDP07204 575 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 SPARCP09486 303 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 HMOX1P09601 288 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 POLR2MP0CAP2 368 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 UBTFL6P0CB48 400 aaPredicted RBP3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 PDE6AP16499 860 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 NPPBP16860 134 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 ERCC2P18074 760 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 KRT15P19012 456 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 CASTP20810 708 aaKnown RBP3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 CDH3P22223 829 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 PTX3P26022 381 aaPredicted RBP3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 RXRBP28702 533 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 HOXC8P31273 242 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 PRKAR1BP31321 381 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 CIITAP33076 1130 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 LONP1P36776 959 aaKnown RBP3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 FNTBP49356 437 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 LIG4P49917 911 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 HSD17B4P51659 736 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 POLGP54098 1239 aaPredicted RBP3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 BCAT1P54687 386 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 ALDH18A1P54886 795 aaKnown RBP3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 STX1BP61266 288 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 RPS16P62249 146 aaKnown RBP3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 NUCB2P80303 420 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 CDK17Q00537 523 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 CAP1Q01518 475 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 PRKCEQ02156 737 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 DSC2Q02487 901 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 SCAPQ12770 1279 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 NEUROD1Q13562 356 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 ITGA7Q13683 1181 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 CBFBQ13951 182 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 GALNT3Q14435 633 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 PDK1Q15118 436 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 EPHA7Q15375 998 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 GPR19Q15760 415 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 DPYSL2Q16555 572 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 CLPPQ16740 277 aaPredicted RBP3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 MEP1BQ16820 701 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 PROSER3Q2NL68 480 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 DPY19L1Q2PZI1 675 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 TWISTNBQ3B726 338 aaPredicted RBP3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 ZNF792Q3KQV3 632 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 ZNF628Q5EBL2 1059 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 C3orf38Q5JPI3 329 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 KHDC1LQ5JSQ8 128 aa3.3□□□□□ -1.88
CTDSPL-203ENST00000416688 COLEC12Q5KU26 742 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms