RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 KRBA1A5PL33 1030 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 SMTNL1A8MU46 457 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 XPO1O14980 1071 aaKnown RBP18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 ZDHHC11BP0C7U3 371 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 ZNF18P17022 549 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 CDK11BP21127 795 aaKnown RBP18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 RFX1P22670 979 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 BRD2P25440 801 aaKnown RBP18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 ZNF165P49910 485 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 APBA1Q02410 837 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 PRKCQQ04759 706 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 ARHGAP44Q17R89 818 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 FKBP15Q5T1M5 1219 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 HECTD3Q5T447 861 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 TFAP2BQ92481 460 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 SHC3Q92529 594 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 LRRC3BQ96PB8 259 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 CYP2S1Q96SQ9 504 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 FUCA2Q9BTY2 467 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 IRF2BPLQ9H1B7 796 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 LIMA1Q9UHB6 759 aaKnown RBP18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 CHORDC1Q9UHD1 332 aaPredicted RBP18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 DNAJC12Q9UKB3 198 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 ARHGAP26Q9UNA1 814 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 CCL26Q9Y258 94 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 PATJQ8NI35 1801 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 KMT2EQ8IZD2 1858 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 DENND4CQ5VZ89 1909 aa18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 MED7O43513 233 aa18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 OLFM2O95897 454 aa18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 PDGFBP01127 241 aaPredicted RBP18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 AVPR2P30518 371 aa18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 SLC7A9P82251 487 aa18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 PDE4CQ08493 712 aa18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 KCNMA1Q12791 1236 aa18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 MLF2Q15773 248 aaPredicted RBP18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 SLC44A4Q53GD3 710 aa18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 RAB41Q5JT25 222 aa18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 CC2D1AQ6P1N0 951 aaPredicted RBP18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 CCDC186Q7Z3E2 898 aa18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 USP3Q9Y6I4 520 aa18.98■□□□□ 0.63
SEMA3B-201ENST00000416295 M0QYV0 167 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 ARNTLO00327 626 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 CYP26A1O43174 497 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 TCF3P15923 654 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 USP8P40818 1118 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 PLA2G4AP47712 749 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 PSEN1P49768 467 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 COPB1P53618 953 aaKnown RBP18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 USP4Q13107 963 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 ZNF77Q15935 545 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 MEA1Q16626 185 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 PKDCCQ504Y2 493 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 IER5LQ5T953 404 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 PRSS33Q8NF86 280 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 FLCNQ8NFG4 579 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 UBA3Q8TBC4 463 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 CSGALNACT1Q8TDX6 532 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 LSM14BQ9BX40 385 aaKnown RBP18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 NACA2Q9H009 215 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 LRRC4Q9HBW1 653 aa18.97■□□□□ 0.63
SEMA3B-201ENST00000416295 LRRC10BA6NIK2 292 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 LGALS16A8MUM7 142 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 BECN2A8MW95 431 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 STK25O00506 426 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 COCHO43405 550 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 TLR5O60602 858 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 GNA15P30679 374 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 CLCN5P51795 746 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 VCPP55072 806 aaKnown RBP18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 STARD6P59095 220 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 MTF1Q14872 753 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 KLHDC7AQ5VTJ3 777 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 DDX42Q86XP3 938 aaKnown RBP eCLIP18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 DHX40Q8IX18 779 aaKnown RBP18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 ARHGAP18Q8N392 663 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 KIAA1958Q8N8K9 716 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 SH3RF2Q8TEC5 729 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 KCTD13Q8WZ19 329 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 MSANTD3Q96H12 275 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 ZSWIM1Q9BR11 485 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 RNF38Q9H0F5 515 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 HSD3B7Q9H2F3 369 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 TBC1D17Q9HA65 648 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 PLCB1Q9NQ66 1216 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 CYLDQ9NQC7 956 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 HEBP1Q9NRV9 189 aa18.96■□□□□ 0.63
SEMA3B-201ENST00000416295 ZNF638Q14966 1978 aaKnown RBP18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 TULP2O00295 520 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 THAP12O43422 761 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 CAVIN2O95810 425 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 MBL2P11226 248 aaPredicted RBP18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 GLULP15104 373 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 UCHL3P15374 230 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 TKTL1P51854 596 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 MLLT6P55198 1093 aaPredicted RBP18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 RAPGEF1Q13905 1077 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 PDGFRLQ15198 375 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 ZSCAN23Q3MJ62 389 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms