RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 TBC1D4O60343 1298 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 HSF2BPO75031 334 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 EFEMP2O95967 443 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 ZBED1O96006 694 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 USP17L7P0C7H9 530 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 ATP2A2P16615 1042 aaKnown RBP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 ATP11AP98196 1134 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 KRT17Q04695 432 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 ADCY1Q08828 1119 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 SMARCB1Q12824 385 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 GPR17Q13304 367 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 C15orf59Q2T9L4 293 aaPredicted RBP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 CCDC14Q49A88 953 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 ODF2Q5BJF6 829 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 RAB41Q5JT25 222 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 TEX35Q5T0J7 233 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 RSPO2Q6UXX9 243 aaPredicted RBP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 ATAD1Q8NBU5 361 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 PHOSPHO2Q8TCD6 241 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 ACTRT1Q8TDG2 376 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 PIK3R5Q8WYR1 880 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 RPGRIP1Q96KN7 1286 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 RNPC3Q96LT9 517 aaKnown RBP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 RAD9AQ99638 391 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 PNPLA8Q9NP80 782 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 CHST7Q9NS84 486 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 CCDC85CA6NKD9 419 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 TRIM66O15016 1216 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 SART1O43290 800 aaKnown RBP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 TADA3O75528 432 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 PYGMP11217 842 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 TCF4P15884 667 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 RPL17P18621 184 aaKnown RBP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 GLUD2P49448 558 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 DAOAP59103 153 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 YWHAZP63104 245 aaKnown RBP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 C2orf54Q08AI8 447 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 IFRD2Q12894 506 aaPredicted RBP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 LONRF2Q1L5Z9 754 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 TRNP1Q6NT89 227 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 RNF19BQ6ZMZ0 732 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 DDX53Q86TM3 631 aaKnown RBP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 RNF168Q8IYW5 571 aaPredicted RBP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 RASGEF1CQ8N431 466 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 SPPL2BQ8TCT7 592 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 UBXN4Q92575 508 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 ABHD8Q96I13 439 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 HERC2P3Q9BVR0 1158 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 ZWILCHQ9H900 591 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 NGRNQ9NPE2 291 aaKnown RBP13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 MTRRQ9UBK8 725 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 PCSK1NQ9UHG2 260 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 BACE2Q9Y5Z0 518 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 VWA8A3KMH1 1905 aa13.16□□□□□ -0.3
PRAMEF9-201ENST00000415919 MTMR11A4FU01 709 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 DPYSL4O14531 572 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 CAPN9O14815 690 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 LRCH4O75427 683 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 FGGP02679 453 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 URODP06132 367 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 GLI1P08151 1106 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 OR1D2P34982 312 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 GTF2F1P35269 517 aaKnown RBP eCLIP13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 MAGEA11P43364 429 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 SMC1AQ14683 1233 aaKnown RBP13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 CLUL1Q15846 466 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 DDR2Q16832 855 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 MGAT5BQ3V5L5 792 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 SH3PXD2AQ5TCZ1 1133 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 LRRC38Q5VT99 294 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 AADACL2Q6P093 401 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 SCYL2Q6P3W7 929 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 ARCQ7LC44 396 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 CCDC50Q8IVM0 306 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 KATNAL2Q8IYT4 538 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 DEFB106AQ8N104 65 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 VPS52Q8N1B4 723 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 SPATA4Q8NEY3 305 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 FAM172AQ8WUF8 416 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 NAP1L3Q99457 506 aaPredicted RBP13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 SEPT5Q99719 369 aaPredicted RBP13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 POPDC2Q9HBU9 364 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 SLC27A5Q9Y2P5 690 aa13.15□□□□□ -0.3
PRAMEF9-201ENST00000415919 YJEFN3A6XGL0 299 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 E7ENQ6 273 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 CTIFO43310 598 aaKnown RBP13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 DAB1O75553 588 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 FGF18O76093 207 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 ZRANB2O95218 330 aaKnown RBP eCLIP13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 KRT1P04264 644 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 KRT7P08729 469 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 MIPP30301 263 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 CA8P35219 290 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 CETN2P41208 172 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 MATKP42679 507 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 PTPN9P43378 593 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 SLC5A3P53794 718 aa13.14□□□□□ -0.31
PRAMEF9-201ENST00000415919 DSG1Q02413 1049 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms