RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 USP46P62068 366 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 MRPS21P82921 87 aaKnown RBP14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 RING1Q06587 406 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 ACAP1Q15027 740 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 SOWAHAQ2M3V2 549 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 EPM2AIP1Q7L775 607 aaPredicted RBP14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 C12orf40Q86WS4 652 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 SYT12Q8IV01 421 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 IL17RCQ8NAC3 791 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 XXYLT1Q8NBI6 393 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 WHAMMQ8TF30 809 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 SCFD1Q8WVM8 642 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 MYLPFQ96A32 169 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 SPACA7Q96KW9 195 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 SLC32A1Q9H598 525 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 AGPAT3Q9NRZ7 376 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 BCCIPQ9P287 314 aaKnown RBP eCLIP14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 SIX4Q9UIU6 781 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 ITGA11Q9UKX5 1188 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 NEUROG3Q9Y4Z2 214 aa14.1□□□□□ -0.15
CTHRC1-202ENST00000415886 FAM208BQ5VWN6 2430 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 TNFRSF10BO14763 440 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 MAP3K13O43283 966 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 ACTN4O43707 911 aaKnown RBP14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 DLATP10515 647 aaKnown RBP14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 BDNFP23560 247 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 LMO2P25791 158 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 MAGEA11P43364 429 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 LHX1P48742 406 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 PDE6CP51160 858 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 SIM1P81133 766 aaPredicted RBP14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 KDSRQ06136 332 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 DHCR24Q15392 516 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 SNRNP35Q16560 246 aaKnown RBP14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 KMT5BQ4FZB7 885 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 EMC10Q5UCC4 262 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 LMBRD2Q68DH5 695 aaPredicted RBP14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 FAM171BQ6P995 826 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 CBWD2Q8IUF1 395 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 TOP6BLQ8N6T0 577 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 SPATA18Q8TC71 538 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 HMGB4Q8WW32 186 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 CCDC127Q96BQ5 260 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 SYT15Q9BQS2 421 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 MTMR12Q9C0I1 747 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 RNF38Q9H0F5 515 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 GDPD2Q9HCC8 539 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 CRTAC1Q9NQ79 661 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 SMPD4Q9NXE4 827 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 MAGEC2Q9UBF1 373 aaPredicted RBP14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 LHX6Q9UPM6 363 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 HPSEQ9Y251 543 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 CPQQ9Y646 472 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 SPEGQ15772 3267 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 ASPMQ8IZT6 3477 aa14.09□□□□□ -0.15
CTHRC1-202ENST00000415886 TGFB1I1O43294 461 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 CLSTN1O94985 981 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 ZNF202O95125 648 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 KAT7O95251 611 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 RPN1P04843 607 aaKnown RBP14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 CFIP05156 583 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 ITPKAP23677 461 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 HOXD13P35453 343 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 GRIK1P39086 918 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 TRPC3Q13507 836 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 MAP7D1Q3KQU3 841 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 LYSMD4Q5XG99 296 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 SLC23A3Q6PIS1 610 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 LRSAM1Q6UWE0 723 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 KRBA2Q6ZNG9 492 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 C4orf50Q6ZRC1 276 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 DENND5BQ6ZUT9 1274 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 PIP4P1Q86T03 277 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 ADGRG2Q8IZP9 1017 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 KBTBD7Q8WVZ9 684 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 SPATA17Q96L03 361 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 PNKPQ96T60 521 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 POLMQ9NP87 494 aaPredicted RBP14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 INTS13Q9NVM9 706 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 TRPM5Q9NZQ8 1165 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 PILRBQ9UKJ0 227 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 MSRB2Q9Y3D2 182 aa14.08□□□□□ -0.16
CTHRC1-202ENST00000415886 TCRBV21S2A2A0A5A6 115 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 ADAM23O75077 832 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 PHACTR2O75167 634 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 APODP05090 189 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 PFKLP17858 780 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 EIF2DP41214 584 aaKnown RBP14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 KIR2DL1P43626 348 aaPredicted RBP14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 SLC7A9P82251 487 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 CYP27A1Q02318 531 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 EHHADHQ08426 723 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 STK4Q13043 487 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 SEMA3BQ13214 749 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 BMT2Q1RMZ1 405 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 EOGTQ5NDL2 527 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 RHBDF2Q6PJF5 856 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 VSTM1Q6UX27 236 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 WDR49Q8IV35 697 aa14.07□□□□□ -0.16
CTHRC1-202ENST00000415886 PGBD3Q8N328 593 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms