RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 RASGEF1CQ8N431 466 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 HES6Q96HZ4 224 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 HNRNPABQ99729 332 aaKnown RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 TCF25Q9BQ70 676 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 EPB41L5Q9HCM4 733 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 OSGEPQ9NPF4 335 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.48□□□□□ -0.73
DDB1-202ENST00000414411 PTPRDP23468 1912 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 ATG2AQ2TAZ0 1938 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 TMEM265A0A087WTH1 108 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 ESYT3A0FGR9 886 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 ANKRD62A6NC57 917 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 O00370 1275 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 SOX1O00570 391 aaPredicted RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 TEX28O15482 410 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 BUB1BO60566 1050 aaPredicted RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 VNN2O95498 520 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 CD19P15391 556 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 ABCB4P21439 1286 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 TNFAIP3P21580 790 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 OR1D2P34982 312 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 CDR2Q01850 454 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 RAB33AQ14088 237 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 MAPRE1Q15691 268 aaKnown RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 SGO2Q562F6 1265 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 MDH1BQ5I0G3 518 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 LCLAT1Q6UWP7 414 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 ZNF677Q86XU0 584 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 DCP1BQ8IZD4 617 aaKnown RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 FUKQ8N0W3 1084 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 TSEN2Q8NCE0 465 aaKnown RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 ZNF461Q8TAF7 563 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 SLC35G2Q8TBE7 412 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 CYFIP2Q96F07 1278 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 PCED1BQ96HM7 432 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 AGPAT1Q99943 283 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 SH3GL2Q99962 352 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 B3GNT5Q9BYG0 378 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 DNAI2Q9GZS0 605 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 LMAN2LQ9H0V9 348 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 TTYH1Q9H313 450 aaPredicted RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 TAS2R14Q9NYV8 317 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 NFU1Q9UMS0 254 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 PCDHGC3Q9UN70 934 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 WDR27A2RRH5 827 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 RFXAPO00287 272 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 CFHP08603 1231 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 FMO1Q01740 532 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 ROR1Q01973 937 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 CREMQ03060 361 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 SMARCB1Q12824 385 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 NFE2Q16621 373 aaPredicted RBP10.47□□□□□ -0.73
DDB1-202ENST00000414411 SLC39A12Q504Y0 691 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 PKDCCQ504Y2 493 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 PRRC2BQ5JSZ5 2229 aaKnown RBP10.47□□□□□ -0.73
DDB1-202ENST00000414411 ALS2CLQ60I27 953 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 KLHL7Q8IXQ5 586 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 GOLGA6L1Q8N7Z2 621 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 SLC2A14Q8TDB8 520 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 GDPD5Q8WTR4 605 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 SLC20A1Q8WUM9 679 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 CASKIN2Q8WXE0 1202 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 ARHGEF26Q96DR7 871 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 KLHL5Q96PQ7 755 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 THAP2Q9H0W7 228 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 ENTPD7Q9NQZ7 604 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 FAM49BQ9NUQ9 324 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 SEPT11Q9NVA2 429 aaKnown RBP10.47□□□□□ -0.73
DDB1-202ENST00000414411 AMFRQ9UKV5 643 aa10.47□□□□□ -0.73
DDB1-202ENST00000414411 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.47□□□□□ -0.73
DDB1-202ENST00000414411 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.46□□□□□ -0.73
DDB1-202ENST00000414411 CCDC188H7C350 402 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 THAP12O43422 761 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 C1RP00736 705 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 MMEP08473 750 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 CCDC130P13994 396 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 ACTN2P35609 894 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 NDUFV1P49821 464 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 PDE6CP51160 858 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 HADHBP55084 474 aaKnown RBP10.46□□□□□ -0.73
DDB1-202ENST00000414411 STILQ15468 1287 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 TAF3Q5VWG9 929 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 PLPP4Q5VZY2 271 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 TPGS2Q68CL5 300 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 LILRA6Q6PI73 481 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 RNF19BQ6ZMZ0 732 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 MREGQ8N565 214 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 WDTC1Q8N5D0 677 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 EIF1ADQ8N9N8 165 aaKnown RBP10.46□□□□□ -0.73
DDB1-202ENST00000414411 ANKRD52Q8NB46 1076 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 MICAL1Q8TDZ2 1067 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 IFT81Q8WYA0 676 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 FUBP3Q96I24 572 aaKnown RBP eCLIP10.46□□□□□ -0.73
DDB1-202ENST00000414411 PCDHB18PQ96TA0 734 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 PLEKHA4Q9H4M7 779 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 TMEM30AQ9NV96 361 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 CALCOCO1Q9P1Z2 691 aa10.46□□□□□ -0.73
DDB1-202ENST00000414411 MTCL1Q9Y4B5 1905 aaKnown RBP10.46□□□□□ -0.73
DDB1-202ENST00000414411 MTMR11A4FU01 709 aa10.46□□□□□ -0.74
DDB1-202ENST00000414411 BHMG1C9JSJ3 638 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms