RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CRTAC1Q9NQ79 661 aa10.21□□□□□ -0.77
RFFL-203ENST00000413582 TRPM5Q9NZQ8 1165 aa10.21□□□□□ -0.77
RFFL-203ENST00000413582 CALCOCO1Q9P1Z2 691 aa10.21□□□□□ -0.77
RFFL-203ENST00000413582 CFAP97Q9P2B7 532 aa10.21□□□□□ -0.77
RFFL-203ENST00000413582 SIX4Q9UIU6 781 aa10.21□□□□□ -0.77
RFFL-203ENST00000413582 ITGA11Q9UKX5 1188 aa10.21□□□□□ -0.77
RFFL-203ENST00000413582 SNX9Q9Y5X1 595 aa10.21□□□□□ -0.77
RFFL-203ENST00000413582 IGHV1OR15-9A0A0B4J2B8 117 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.2□□□□□ -0.78
RFFL-203ENST00000413582 SH3BP5O60239 455 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 KRT18P05783 430 aaKnown RBP10.2□□□□□ -0.78
RFFL-203ENST00000413582 BDNFP23560 247 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 LHX1P48742 406 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 NOP14P78316 857 aaKnown RBP10.2□□□□□ -0.78
RFFL-203ENST00000413582 SLC14A1Q13336 389 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 POSTNQ15063 836 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 TRIP6Q15654 476 aaKnown RBP10.2□□□□□ -0.78
RFFL-203ENST00000413582 SOWAHAQ2M3V2 549 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 LY6G5CQ5SRR4 150 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 SLC36A4Q6YBV0 504 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 DENND5BQ6ZUT9 1274 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 LIMS2Q7Z4I7 341 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 SFR1Q86XK3 245 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 ZNF513Q8N8E2 541 aaPredicted RBP10.2□□□□□ -0.78
RFFL-203ENST00000413582 HVCN1Q96D96 273 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 SAAL1Q96ER3 474 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 AK8Q96MA6 479 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 HSPA12BQ96MM6 686 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 MTMR12Q9C0I1 747 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 CCDC86Q9H6F5 360 aaKnown RBP10.2□□□□□ -0.78
RFFL-203ENST00000413582 MAGEC2Q9UBF1 373 aaPredicted RBP10.2□□□□□ -0.78
RFFL-203ENST00000413582 HCN2Q9UL51 889 aa10.2□□□□□ -0.78
RFFL-203ENST00000413582 KNTC1P50748 2209 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 A0A1W2PQD8 194 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 A0A1W2PQF6 199 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 HOXC11O43248 304 aaPredicted RBP10.19□□□□□ -0.78
RFFL-203ENST00000413582 SYPP08247 313 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 KRT19P08727 400 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 HOXB2P14652 356 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 LMO2P25791 158 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 PPP3CCP48454 512 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 KCNA1Q09470 495 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 MCTP1Q6DN14 999 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 ZNF720Q7Z2F6 126 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 TRMT11Q7Z4G4 463 aaKnown RBP10.19□□□□□ -0.78
RFFL-203ENST00000413582 DDX42Q86XP3 938 aaKnown RBP eCLIP10.19□□□□□ -0.78
RFFL-203ENST00000413582 MIB1Q86YT6 1006 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 NAXDQ8IW45 347 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 CSGALNACT2Q8N6G5 542 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 PNPLA1Q8N8W4 532 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 TERB1Q8NA31 727 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 MDM1Q8TC05 714 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 CACTINQ8WUQ7 758 aaKnown RBP10.19□□□□□ -0.78
RFFL-203ENST00000413582 LARP4BQ92615 738 aaKnown RBP10.19□□□□□ -0.78
RFFL-203ENST00000413582 COL26A1Q96A83 441 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 CALML4Q96GE6 196 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 PCED1BQ96HM7 432 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 ZFRQ96KR1 1074 aaKnown RBP10.19□□□□□ -0.78
RFFL-203ENST00000413582 STRA6Q9BX79 667 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 CD248Q9HCU0 757 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 TMEM30AQ9NV96 361 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 RBAKQ9NYW8 714 aaPredicted RBP10.19□□□□□ -0.78
RFFL-203ENST00000413582 CDH9Q9ULB4 789 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 RAXQ9Y2V3 346 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 KIF3AQ9Y496 699 aa10.19□□□□□ -0.78
RFFL-203ENST00000413582 PTPRJQ12913 1337 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 E2F8A0AVK6 867 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 TBC1D3BA6NDS4 549 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 F8VP50 259 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 TRIM66O15016 1216 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 CBFA2T3O75081 653 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 ZNF217O75362 1048 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 TULP3O75386 442 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 MBL2P11226 248 aaPredicted RBP10.18□□□□□ -0.78
RFFL-203ENST00000413582 NDUFV2P19404 249 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 ANXA13P27216 316 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 GJB2P29033 226 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 DDIT3P35638 169 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 GRIK1P39086 918 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 UBA7P41226 1012 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 RBP5P82980 135 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 CYP27A1Q02318 531 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 GRIN1Q05586 938 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 MAPRE1Q15691 268 aaKnown RBP10.18□□□□□ -0.78
RFFL-203ENST00000413582 C10orf76Q5T2E6 689 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 TRIML1Q8N9V2 468 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 KCNV2Q8TDN2 545 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 C8orf48Q96LL4 319 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 PDE11AQ9HCR9 933 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 CD93Q9NPY3 652 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 SCUBE2Q9NQ36 999 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 EHD2Q9NZN4 543 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 TBC1D14Q9P2M4 693 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 CYP8B1Q9UNU6 501 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 SMC3Q9UQE7 1217 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 NME7Q9Y5B8 376 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 PTPRQQ9UMZ3 2332 aa10.18□□□□□ -0.78
RFFL-203ENST00000413582 GOLGA8IPA6NC78 632 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 GOLGA8JA6NMD2 632 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 TULP1O00294 542 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms