RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 OR6B3Q8NGW1 331 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 PPCSQ9HAB8 311 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 UBN1Q9NPG3 1134 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 CNTN3Q9P232 1028 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 SMAPO00193 183 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 SDC4P31431 198 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 STIP1P31948 543 aaKnown RBP17.2■□□□□ 0.34
HCG18-233ENST00000412685 NRLP54845 237 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 FKBP1BP68106 108 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 SOWAHAQ2M3V2 549 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 BOLA3Q53S33 107 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 NUGGCQ68CJ6 796 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 DARS2Q6PI48 645 aaKnown RBP17.2■□□□□ 0.34
HCG18-233ENST00000412685 UNC93AQ86WB7 457 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 ATP11CQ8NB49 1132 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.2■□□□□ 0.34
HCG18-233ENST00000412685 FAM172AQ8WUF8 416 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 KHSRPQ92945 711 aaKnown RBP eCLIP17.2■□□□□ 0.341e-15■■■■□ 20.7
HCG18-233ENST00000412685 RNF157Q96PX1 679 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 APOL6Q9BWW8 343 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 SLC5A4Q9NY91 659 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 SLC24A2Q9UI40 661 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 XPO7Q9UIA9 1087 aaKnown RBP17.2■□□□□ 0.34
HCG18-233ENST00000412685 GJD2Q9UKL4 321 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 E7ESA3 106 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 PAPSS1O43252 624 aaPredicted RBP17.2■□□□□ 0.34
HCG18-233ENST00000412685 GABBR2O75899 941 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 ECM2O94769 699 aaPredicted RBP17.2■□□□□ 0.34
HCG18-233ENST00000412685 KRT15P19012 456 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 AKAP5P24588 427 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 BASP1P80723 227 aaKnown RBP17.2■□□□□ 0.34
HCG18-233ENST00000412685 PDK2Q15119 407 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 PKN2Q16513 984 aaKnown RBP17.2■□□□□ 0.34
HCG18-233ENST00000412685 CNPY4Q8N129 248 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 SGSM3Q96HU1 749 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 WDR83Q9BRX9 315 aaKnown RBP17.2■□□□□ 0.34
HCG18-233ENST00000412685 DPEP3Q9H4B8 488 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 TRABDQ9H4I3 376 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 GPATCH2LQ9NWQ4 482 aa17.2■□□□□ 0.34
HCG18-233ENST00000412685 GNEQ9Y223 722 aaKnown RBP17.2■□□□□ 0.34
HCG18-233ENST00000412685 A8MXQ7 604 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 OAS1P00973 400 aaKnown RBP17.19■□□□□ 0.34
HCG18-233ENST00000412685 SSTR1P30872 391 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 PHBP35232 272 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 RASA2Q15283 850 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 ZC3H12AQ5D1E8 599 aaKnown RBP17.19■□□□□ 0.34
HCG18-233ENST00000412685 EFHC2Q5JST6 749 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 ARHGAP17Q68EM7 881 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 PDIK1LQ8N165 341 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 STK32AQ8WU08 396 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 TEKT4Q8WW24 435 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 MRRFQ96E11 262 aaKnown RBP17.19■□□□□ 0.34
HCG18-233ENST00000412685 MAGEB18Q96M61 343 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 TGS1Q96RS0 853 aaKnown RBP17.19■□□□□ 0.34
HCG18-233ENST00000412685 LPIN3Q9BQK8 851 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 B3GNT5Q9BYG0 378 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 RABGEF1Q9UJ41 708 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 ZMYND8Q9ULU4 1186 aaPredicted RBP17.19■□□□□ 0.34
HCG18-233ENST00000412685 UBQLN1Q9UMX0 589 aaKnown RBP17.19■□□□□ 0.34
HCG18-233ENST00000412685 HCRTO43612 131 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 ATP2C2O75185 946 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 GHRP10912 638 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 IL4RP24394 825 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 SCTRP47872 440 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 SNX16P57768 344 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 HIC1Q14526 733 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 C1orf228Q6PIY5 440 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 PLD5Q8N7P1 536 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 DNAJB3Q8WWF6 145 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 LENG1Q96BZ8 264 aaPredicted RBP17.19■□□□□ 0.34
HCG18-233ENST00000412685 KIF9Q9HAQ2 790 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 SENP1Q9P0U3 644 aa17.19■□□□□ 0.34
HCG18-233ENST00000412685 PSMC3IPQ9P2W1 217 aaPredicted RBP17.19■□□□□ 0.34
HCG18-233ENST00000412685 PIN4Q9Y237 131 aaKnown RBP17.19■□□□□ 0.34
HCG18-233ENST00000412685 SPAG7O75391 227 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 GEMIN4P57678 1058 aaKnown RBP17.18■□□□□ 0.34
HCG18-233ENST00000412685 MTM1Q13496 603 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 MFSD10Q14728 455 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 FBXO47Q5MNV8 452 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 C3orf62Q6ZUJ4 267 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 ZDHHC17Q8IUH5 632 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 C7orf31Q8N865 590 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 FBXO36Q8NEA4 188 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 TMEM40Q8WWA1 233 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 TBCBQ99426 244 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 PCDH18Q9HCL0 1135 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 USP15Q9Y4E8 981 aaPredicted RBP17.18■□□□□ 0.34
HCG18-233ENST00000412685 H7C0C1 242 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 PRPF4O43172 522 aaKnown RBP eCLIP17.18■□□□□ 0.347e-7■■□□□ 13.8
HCG18-233ENST00000412685 DESP17661 470 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 ATP5OP48047 213 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 WDR4P57081 412 aaKnown RBP17.18■□□□□ 0.34
HCG18-233ENST00000412685 RNASELQ05823 741 aaKnown RBP17.18■□□□□ 0.34
HCG18-233ENST00000412685 ZKSCAN8Q15776 578 aaPredicted RBP17.18■□□□□ 0.34
HCG18-233ENST00000412685 BBS9Q3SYG4 887 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 TLK2Q86UE8 772 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 PQLC3Q8N755 202 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 USP6NLQ92738 828 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 SMC6Q96SB8 1091 aa17.18■□□□□ 0.34
HCG18-233ENST00000412685 SNRNP25Q9BV90 132 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms