RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 YAF2Q8IY57 180 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 ANKRD20A12PQ8NF67 263 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 FLCNQ8NFG4 579 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 BPIFA3Q9BQP9 254 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 HEBP1Q9NRV9 189 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 TDP1Q9NUW8 608 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 DENND4CQ5VZ89 1909 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 ANAPC1Q9H1A4 1944 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 SMTNL1A8MU46 457 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 MDM4O15151 490 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 GABBR2O75899 941 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 LCP1P13796 627 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 TKTL1P51854 596 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 CNGA2Q16280 664 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 FKBP15Q5T1M5 1219 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 PMF1Q6P1K2 205 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 SHC3Q92529 594 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 CEP295NLQ96MC4 621 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 C1QTNF1Q9BXJ1 281 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 FAM124BQ9H5Z6 455 aaPredicted RBP12.63□□□□□ -0.39
NEDD1-202ENST00000411739 NLRC4Q9NPP4 1024 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 EHD2Q9NZN4 543 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.63□□□□□ -0.39
NEDD1-202ENST00000411739 CNTN6Q9UQ52 1028 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 ZNF263O14978 683 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 COCHO43405 550 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 UCHL3P15374 230 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 DDX6P26196 483 aaKnown RBP eCLIP12.62□□□□□ -0.39
NEDD1-202ENST00000411739 GNA15P30679 374 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 BCAT1P54687 386 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 BST2Q10589 180 aaKnown RBP12.62□□□□□ -0.39
NEDD1-202ENST00000411739 PKDCCQ504Y2 493 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 ENOSF1Q7L5Y1 443 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 SCD5Q86SK9 330 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 SLC47A2Q86VL8 602 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 PASD1Q8IV76 773 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 CELF5Q8N6W0 485 aaKnown RBP12.62□□□□□ -0.39
NEDD1-202ENST00000411739 BPIFB1Q8TDL5 484 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 SH3RF2Q8TEC5 729 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 ZNF606Q8WXB4 792 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 NAP1L5Q96NT1 182 aaPredicted RBP12.62□□□□□ -0.39
NEDD1-202ENST00000411739 GKN1Q9NS71 199 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 GTSE1Q9NYZ3 720 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 KIAA1257Q9ULG3 409 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 LGALS16A8MUM7 142 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 GPR37L1O60883 481 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 MBL2P11226 248 aaPredicted RBP12.62□□□□□ -0.39
NEDD1-202ENST00000411739 CLCN1P35523 988 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 SOX9P48436 509 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 SLC8A3P57103 927 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 POLR2FP61218 127 aaKnown RBP12.62□□□□□ -0.39
NEDD1-202ENST00000411739 ADIGQ0VDE8 80 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 SLC44A4Q53GD3 710 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 WBP2Q969T9 261 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 ULBP1Q9BZM6 244 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 MFSD1Q9H3U5 465 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 FBXO44Q9H4M3 255 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 PLCB1Q9NQ66 1216 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 SLC2A4RGQ9NR83 387 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 RAPGEFL1Q9UHV5 662 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 NAGPAQ9UK23 515 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 SCML2Q9UQR0 700 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 CPQQ9Y646 472 aa12.62□□□□□ -0.39
NEDD1-202ENST00000411739 FAM92AA1XBS5 289 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 LRRC10BA6NIK2 292 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 XPO1O14980 1071 aaKnown RBP12.61□□□□□ -0.39
NEDD1-202ENST00000411739 OAS1P00973 400 aaKnown RBP12.61□□□□□ -0.39
NEDD1-202ENST00000411739 HECTD3Q5T447 861 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 CLEC4CQ8WTT0 213 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 NAA15Q9BXJ9 866 aaKnown RBP12.61□□□□□ -0.39
NEDD1-202ENST00000411739 GANQ9H2C0 597 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 LINC00597Q9H2U6 94 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 LRRC4Q9HBW1 653 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 ST7Q9NRC1 585 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 CYTH4Q9UIA0 394 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 SIK3Q9Y2K2 1263 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 WNT6Q9Y6F9 365 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 ZDBF2Q9HCK1 2354 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 PI15O43692 258 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 ZDHHC11BP0C7U3 371 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 IRF1P10914 325 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 SLC35F5Q8WV83 523 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 FOXQ1Q9C009 403 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 NACA2Q9H009 215 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 MIS12Q9H081 205 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 EBF3Q9H4W6 596 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 ARHGEF3Q9NR81 526 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 TLR8Q9NR97 1041 aaKnown RBP12.61□□□□□ -0.39
NEDD1-202ENST00000411739 WNT16Q9UBV4 365 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 USP3Q9Y6I4 520 aa12.61□□□□□ -0.39
NEDD1-202ENST00000411739 OTOL1A6NHN0 477 aaPredicted RBP12.6□□□□□ -0.39
NEDD1-202ENST00000411739 LEFTY2O00292 366 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 TLR5O60602 858 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 RARGP13631 454 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 ARSAP15289 507 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 PPP3CCP48454 512 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 VCPP55072 806 aaKnown RBP12.6□□□□□ -0.39
NEDD1-202ENST00000411739 FCHO2Q0JRZ9 810 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 RAB41Q5JT25 222 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 TAF3Q5VWG9 929 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms