RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 FBRSL1Q9HCM7 1045 aaKnown RBP18.75■□□□□ 0.59
LSM5-204ENST00000409909 C2orf42Q9NWW7 574 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 COMMD8Q9NX08 183 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 SMPD4Q9NXE4 827 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 CHMP5Q9NZZ3 219 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 CPQQ9Y646 472 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 HHLA1C9JL84 531 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 TRDMT1O14717 391 aaKnown RBP18.74■□□□□ 0.59
LSM5-204ENST00000409909 FAM200BP0CF97 657 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 GJA4P35212 333 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 IFNAR2P48551 515 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 SATB1Q01826 763 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 ZNF394Q53GI3 561 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 TMEM196Q5HYL7 178 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 FSTL4Q6MZW2 842 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 ZC3H14Q6PJT7 736 aaKnown RBP18.74■□□□□ 0.59
LSM5-204ENST00000409909 CLEC20AQ6ZU45 233 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 GPRIN1Q7Z2K8 1008 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 FILIP1Q7Z7B0 1213 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 SPEM1Q8N4L4 309 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 NELFBQ8WX92 580 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 FAXDC2Q96IV6 333 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 SEMA4AQ9H3S1 761 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 CISHQ9NSE2 258 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 GMIPQ9P107 970 aa18.74■□□□□ 0.59
LSM5-204ENST00000409909 OTOGLQ3ZCN5 2332 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 DMXL1Q9Y485 3027 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 COCHO43405 550 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 PPP1R2P41236 205 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 GALK1P51570 392 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 CCR3P51677 355 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 UBE2HP62256 183 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 PPP1R26Q5T8A7 1209 aaPredicted RBP18.73■□□□□ 0.59
LSM5-204ENST00000409909 CPA6Q8N4T0 437 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 SLC4A11Q8NBS3 891 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 ZBTB44Q8NCP5 570 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 ATP2A3Q93084 1043 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 ZFRQ96KR1 1074 aaKnown RBP18.73■□□□□ 0.59
LSM5-204ENST00000409909 CEP63Q96MT8 703 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 CCSER2Q9H7U1 834 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 ZSCAN32Q9NX65 697 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 PCDHGA2Q9Y5H1 932 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 SPTBN4Q9H254 2564 aa18.73■□□□□ 0.59
LSM5-204ENST00000409909 ATG2BQ96BY7 2078 aa18.72■□□□□ 0.59
LSM5-204ENST00000409909 SCAMP3O14828 347 aaKnown RBP18.72■□□□□ 0.59
LSM5-204ENST00000409909 LMNAP02545 664 aaKnown RBP18.72■□□□□ 0.59
LSM5-204ENST00000409909 MBL2P11226 248 aaPredicted RBP18.72■□□□□ 0.59
LSM5-204ENST00000409909 HOXC13P31276 330 aa18.72■□□□□ 0.59
LSM5-204ENST00000409909 CXCL12P48061 93 aa18.72■□□□□ 0.59
LSM5-204ENST00000409909 RAD23BP54727 409 aa18.72■□□□□ 0.59
LSM5-204ENST00000409909 HECTD3Q5T447 861 aa18.72■□□□□ 0.59
LSM5-204ENST00000409909 SYNPOQ8N3V7 929 aa18.72■□□□□ 0.59
LSM5-204ENST00000409909 JAKMIP2Q96AA8 810 aa18.72■□□□□ 0.59
LSM5-204ENST00000409909 HEXIM2Q96MH2 286 aaKnown RBP18.72■□□□□ 0.59
LSM5-204ENST00000409909 METTL14Q9HCE5 456 aaKnown RBP18.72■□□□□ 0.59
LSM5-204ENST00000409909 CFAP97Q9P2B7 532 aa18.72■□□□□ 0.59
LSM5-204ENST00000409909 CTNND2Q9UQB3 1225 aa18.72■□□□□ 0.59
LSM5-204ENST00000409909 LILRB5O75023 590 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 EGFP01133 1207 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 TRIM21P19474 475 aaKnown RBP18.71■□□□□ 0.59
LSM5-204ENST00000409909 STX17P56962 302 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 AMPD2Q01433 879 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 GRSF1Q12849 480 aaKnown RBP eCLIP18.71■□□□□ 0.59
LSM5-204ENST00000409909 CAMK4Q16566 473 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 PKN3Q6P5Z2 889 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 FOXR2Q6PJQ5 311 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 ADGRG2Q8IZP9 1017 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 TTC39CQ8N584 583 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 SUMF1Q8NBK3 374 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 ATRIPQ8WXE1 791 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 TMEM176AQ96HP8 235 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 P2RY13Q9BPV8 354 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 DUSP16Q9BY84 665 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 FBXO44Q9H4M3 255 aa18.71■□□□□ 0.59
LSM5-204ENST00000409909 K7ESF4 209 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 CYP26A1O43174 497 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 ACO1P21399 889 aaKnown RBP18.7■□□□□ 0.58
LSM5-204ENST00000409909 FMO5P49326 533 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 TUBP50607 506 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 DMWDQ09019 674 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 LRMPQ12912 555 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 CUL2Q13617 745 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 GAB4Q2WGN9 574 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 CCDC40Q4G0X9 1142 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 KIAA1958Q8N8K9 716 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 EZH1Q92800 747 aaPredicted RBP18.7■□□□□ 0.58
LSM5-204ENST00000409909 FAM126AQ9BYI3 521 aaPredicted RBP18.7■□□□□ 0.58
LSM5-204ENST00000409909 FAM124BQ9H5Z6 455 aaPredicted RBP18.7■□□□□ 0.58
LSM5-204ENST00000409909 PNPLA8Q9NP80 782 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 OSER1Q9NX31 292 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 SCML2Q9UQR0 700 aa18.7■□□□□ 0.58
LSM5-204ENST00000409909 BICDL2A1A5D9 508 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 PMM2O15305 246 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 PAPSS2O95340 614 aaPredicted RBP18.69■□□□□ 0.58
LSM5-204ENST00000409909 NFATC1O95644 943 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 TBX18O95935 607 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 KIF11P52732 1056 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 NR1H3Q13133 447 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 PAK1Q13153 545 aa18.69■□□□□ 0.58
LSM5-204ENST00000409909 UBR7Q8N806 425 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms