RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 GNG11P61952 73 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 MESDQ14696 234 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 TPGS2Q68CL5 300 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 PLEKHA7Q6IQ23 1121 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 DENND5BQ6ZUT9 1274 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 C3orf20Q8ND61 904 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 KCTD13Q8WZ19 329 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 TRIM11Q96F44 468 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 YIPF1Q9Y548 306 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 TCRBV5S1A1TA0A578 114 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 FSCN2O14926 492 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 RFPL2O75678 378 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 PALMO75781 387 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 ZBED1O96006 694 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 GLUD1P00367 558 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 TNNT1P13805 278 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 FLT3P36888 993 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 MAGEA11P43364 429 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 CLCN4P51793 760 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 SLC6A3Q01959 620 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 SMARCB1Q12824 385 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 RAB41Q5JT25 222 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 NUP93Q8N1F7 819 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 EDEM1Q92611 657 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 WDR24Q96S15 920 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 NUDT5Q9UKK9 219 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 PACSIN2Q9UNF0 486 aaPredicted RBP13.22□□□□□ -0.29
PMS1-204ENST00000409823 PRRC2BQ5JSZ5 2229 aaKnown RBP13.21□□□□□ -0.29
PMS1-204ENST00000409823 ENC1O14682 589 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 CCP110O43303 1012 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 BUB1BO60566 1050 aaPredicted RBP13.21□□□□□ -0.29
PMS1-204ENST00000409823 FTCDO95954 541 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 ACADSBP45954 432 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 ALDH1A3P47895 512 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 NRIP1P48552 1158 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 TUFMP49411 452 aaKnown RBP13.21□□□□□ -0.29
PMS1-204ENST00000409823 MRPS5P82675 430 aaKnown RBP13.21□□□□□ -0.29
PMS1-204ENST00000409823 OGDHQ02218 1023 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 CREMQ03060 361 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 ZNF268Q14587 947 aaPredicted RBP13.21□□□□□ -0.29
PMS1-204ENST00000409823 SH3PXD2AQ5TCZ1 1133 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 TRNP1Q6NT89 227 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 DAAM2Q86T65 1068 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 KREMEN2Q8NCW0 462 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 C2orf15Q8WU43 125 aaKnown RBP13.21□□□□□ -0.29
PMS1-204ENST00000409823 SLC22A17Q8WUG5 538 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 KHSRPQ92945 711 aaKnown RBP eCLIP13.21□□□□□ -0.298e-10■■□□□ 12.3
PMS1-204ENST00000409823 MCRS1Q96EZ8 462 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 C8orf48Q96LL4 319 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 PRDM12Q9H4Q4 367 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 INSL5Q9Y5Q6 135 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 NCANO14594 1321 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 PTPRDP23468 1912 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 GRID2IPA4D2P6 1211 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 KIF5CO60282 957 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 C8AP07357 584 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 RPL34P49207 117 aaKnown RBP13.21□□□□□ -0.29
PMS1-204ENST00000409823 CDO1Q16878 200 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 RAB6CQ53S08 254 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 LILRA6Q6PI73 481 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 RHOT2Q8IXI1 618 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 TXLNBQ8N3L3 684 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 TPCN2Q8NHX9 752 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 ZNF592Q92610 1267 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 CFAP57Q96MR6 1250 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 RAB6CQ9H0N0 254 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 MRPL47Q9HD33 250 aaKnown RBP13.21□□□□□ -0.29
PMS1-204ENST00000409823 AVENQ9NQS1 362 aaPredicted RBP13.21□□□□□ -0.29
PMS1-204ENST00000409823 USTQ9Y2C2 406 aa13.21□□□□□ -0.29
PMS1-204ENST00000409823 SOX1O00570 391 aaPredicted RBP13.2□□□□□ -0.3
PMS1-204ENST00000409823 FANCGO15287 622 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 CLASP2O75122 1294 aaKnown RBP13.2□□□□□ -0.3
PMS1-204ENST00000409823 TFE3P19532 575 aaPredicted RBP13.2□□□□□ -0.3
PMS1-204ENST00000409823 DAOAP59103 153 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 ATP11AP98196 1134 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 PPP1R15BQ5SWA1 713 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 PPP1R2P3Q6NXS1 205 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 SLC35F6Q8N357 371 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 ADAM32Q8TC27 787 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 LRCH3Q96II8 777 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 TLE6Q9H808 572 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 MAN1C1Q9NR34 630 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 KCND1Q9NSA2 647 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 HCFC2Q9Y5Z7 792 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 SCINQ9Y6U3 715 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 SYNJ2BP-COX16A0A087WUM0 186 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 SIGLEC16A6NMB1 481 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 SLC38A8A6NNN8 435 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 MYO1FO00160 1098 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 RPL10AP62906 217 aaKnown RBP13.2□□□□□ -0.3
PMS1-204ENST00000409823 TAF10Q12962 218 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 TAF12Q16514 161 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 C15orf59Q2T9L4 293 aaPredicted RBP13.2□□□□□ -0.3
PMS1-204ENST00000409823 DCAF6Q58WW2 860 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 SYPL2Q5VXT5 272 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 SYT10Q6XYQ8 523 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 TCEAL8Q8IYN2 117 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 TTYH1Q9H313 450 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms