RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ZNF81P51508 661 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 NXPH1P58417 271 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 ITIH3Q06033 890 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 FAM153CQ494X1 144 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 PREPLQ4J6C6 727 aaPredicted RBP5.31□□□□□ -1.56
CLK1-203ENST00000409769 C14orf80Q86SX3 495 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 FAM109AQ8N4B1 249 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 SNX19Q92543 992 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 ARMT1Q9H993 441 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 ZMAT3Q9HA38 289 aaKnown RBP5.31□□□□□ -1.56
CLK1-203ENST00000409769 CHPF2Q9P2E5 772 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 USP6P35125 1406 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 EDC4Q6P2E9 1401 aaKnown RBP5.31□□□□□ -1.56
CLK1-203ENST00000409769 MSH6P52701 1360 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 KTN1Q86UP2 1357 aaKnown RBP5.3□□□□□ -1.56
CLK1-203ENST00000409769 A0A1W2PPL8 197 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 A6NNZ2 444 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 ISM1B1AKI9 464 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 KIF20AO95235 890 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 NPR1P16066 1061 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 EN2P19622 333 aaPredicted RBP5.3□□□□□ -1.56
CLK1-203ENST00000409769 CTGFP29279 349 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 VIPR2P41587 438 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 PHKA1P46020 1223 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 CACNB3P54284 484 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 HLTFQ14527 1009 aaKnown RBP eCLIP5.3□□□□□ -1.56
CLK1-203ENST00000409769 EZH2Q15910 746 aaKnown RBP5.3□□□□□ -1.56
CLK1-203ENST00000409769 AMOTQ4VCS5 1084 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 TSTD2Q5T7W7 516 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 FCRLBQ6BAA4 426 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 SWSAP1Q6NVH7 229 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 TAF2Q6P1X5 1199 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 PSD4Q8NDX1 1056 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 IL31RAQ8NI17 732 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 TFAP2BQ92481 460 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 SUCLG2Q96I99 432 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 MOGAT1Q96PD6 335 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 C22orf23Q9BZE7 217 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 PRKRIP1Q9H875 184 aaPredicted RBP5.3□□□□□ -1.56
CLK1-203ENST00000409769 GEMIN8Q9NWZ8 242 aaKnown RBP5.3□□□□□ -1.56
CLK1-203ENST00000409769 FLRT1Q9NZU1 646 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 HESX1Q9UBX0 185 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 ZNF70Q9UC06 446 aaPredicted RBP5.3□□□□□ -1.56
CLK1-203ENST00000409769 DDX20Q9UHI6 824 aaKnown RBP5.3□□□□□ -1.56
CLK1-203ENST00000409769 PIK3C2AO00443 1686 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 NHSL1Q5SYE7 1610 aa5.3□□□□□ -1.56
CLK1-203ENST00000409769 MAP2P11137 1827 aaKnown RBP5.3□□□□□ -1.56
CLK1-203ENST00000409769 NSD2O96028 1365 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 ACEP12821 1306 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 ALS2Q96Q42 1657 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 IQSEC2Q5JU85 1478 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 WIPF3A6NGB9 483 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 TOR1BO14657 336 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 MARCH6O60337 910 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 CYP2C9P11712 490 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 ATF3P18847 181 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 GATA3P23771 443 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 NPTX2P47972 431 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 WNT3P56703 355 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 FAM193AP78312 1265 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 MC2RQ01718 297 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 SLC10A2Q12908 348 aaPredicted RBP5.29□□□□□ -1.56
CLK1-203ENST00000409769 GRM3Q14832 879 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 CNN3Q15417 329 aaKnown RBP5.29□□□□□ -1.56
CLK1-203ENST00000409769 DGKHQ86XP1 1220 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 NSUN7Q8NE18 718 aaKnown RBP5.29□□□□□ -1.56
CLK1-203ENST00000409769 TOR1AIP2Q8NFQ8 470 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 SLC30A5Q8TAD4 765 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 NT5C1BQ96P26 610 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 NELL2Q99435 816 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 MRPS18AQ9NVS2 196 aaKnown RBP5.29□□□□□ -1.56
CLK1-203ENST00000409769 TERF2IPQ9NYB0 399 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 CPA4Q9UI42 421 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.29□□□□□ -1.56
CLK1-203ENST00000409769 KNSTRNQ9Y448 316 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 RAD54BQ9Y620 910 aa5.29□□□□□ -1.56
CLK1-203ENST00000409769 BRD4O60885 1362 aaPredicted RBP5.29□□□□□ -1.56
CLK1-203ENST00000409769 CRYBG1Q9Y4K1 1723 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 A0A087WWL8 130 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 M0QYG6 137 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 TPP1O14773 563 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 FYB1O15117 783 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 ANP32CO43423 234 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 TRIAP1O43715 76 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 UNC5CO95185 931 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 CELA2AP08217 269 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 ATXN1LP0C7T5 689 aaKnown RBP5.28□□□□□ -1.56
CLK1-203ENST00000409769 KCNJ5P48544 419 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 NDUFV1P49821 464 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 GALEQ14376 348 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 RALBP1Q15311 655 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 TXNRD1Q16881 649 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 CD300EQ496F6 205 aaPredicted RBP5.28□□□□□ -1.56
CLK1-203ENST00000409769 APOA5Q6Q788 366 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 CELF5Q8N6W0 485 aaKnown RBP5.28□□□□□ -1.56
CLK1-203ENST00000409769 B3GALNT2Q8NCR0 500 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 FAM46DQ8NEK8 389 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 MYCBPAPQ8TBZ2 947 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 LPIN2Q92539 896 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 ALG8Q9BVK2 526 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms