RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 EPHB3P54753 998 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 BYSLQ13895 437 aaKnown RBP11.88□□□□□ -0.51
SNX13-202ENST00000409604 FAM183BPQ6ZVS7 135 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 SLFN11Q7Z7L1 901 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 FAM71AQ8IYT1 594 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 ING5Q8WYH8 240 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 ZMAT2Q96NC0 199 aaKnown RBP11.88□□□□□ -0.51
SNX13-202ENST00000409604 HCSTQ9UBK5 93 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 USP12O75317 370 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 LGR5O75473 907 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 JCHAINP01591 159 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 NNMTP40261 264 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 CSE1LP55060 971 aaKnown RBP11.88□□□□□ -0.51
SNX13-202ENST00000409604 BRD3Q15059 726 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 DENND5BQ6ZUT9 1274 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 TRPV1Q8NER1 839 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 ACTL9Q8TC94 416 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 SYN2Q92777 582 aaPredicted RBP11.88□□□□□ -0.51
SNX13-202ENST00000409604 ASIC4Q96FT7 647 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 TTC25Q96NG3 672 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 LMCD1Q9NZU5 365 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 C2CD2Q9Y426 696 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 F8W810 466 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 OTUD4Q01804 1114 aaKnown RBP11.88□□□□□ -0.51
SNX13-202ENST00000409604 THOC5Q13769 683 aaKnown RBP11.88□□□□□ -0.51
SNX13-202ENST00000409604 CASP8Q14790 479 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 MORN1Q5T089 497 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 ZNF677Q86XU0 584 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
SNX13-202ENST00000409604 ATPAF2Q8N5M1 289 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 SCAMP5Q8TAC9 235 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 HDAC7Q8WUI4 952 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 SMARCD1Q96GM5 515 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 ZSWIM1Q9BR11 485 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 HTATIP2Q9BUP3 242 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 UBA6A0AVT1 1052 aaPredicted RBP11.88□□□□□ -0.51
SNX13-202ENST00000409604 H7C4K7 107 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 ZNF263O14978 683 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 TUBBP07437 444 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 STX2P32856 288 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 GJA9P57773 515 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 PPP2R5EQ16537 467 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 PTPN20Q4JDL3 420 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 CLEC4CQ8WTT0 213 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 FAM114A2Q9NRY5 505 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 CHMP2BQ9UQN3 213 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 NAALADL1Q9UQQ1 740 aa11.88□□□□□ -0.51
SNX13-202ENST00000409604 AGRPO00253 132 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 VNN1O95497 513 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 CYBBP04839 570 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 CLTBP09497 229 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 HOXC6P09630 235 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 TM4SF4P48230 202 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 ATXN1P54253 815 aaKnown RBP11.87□□□□□ -0.51
SNX13-202ENST00000409604 RPL10AP62906 217 aaKnown RBP11.87□□□□□ -0.51
SNX13-202ENST00000409604 TUBB4BP68371 445 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 ZRSR2Q15696 482 aaKnown RBP11.87□□□□□ -0.51
SNX13-202ENST00000409604 CFAP52Q8N1V2 620 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 MRPL9Q9BYD2 267 aaKnown RBP11.87□□□□□ -0.51
SNX13-202ENST00000409604 TKTL2Q9H0I9 626 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 PPME1Q9Y570 386 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 ADAMTS7Q9UKP4 1686 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 NAV1Q8NEY1 1877 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 FRMD3A2A2Y4 597 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 CCDC188H7C350 402 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 ZSCAN5DPP0CG00 497 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 NPR3P17342 541 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 MSH2P43246 934 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 SPARCL1Q14515 664 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 LPIN1Q14693 890 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 PMF1Q6P1K2 205 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 NPNTQ6UXI9 565 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 SLC13A5Q86YT5 568 aaPredicted RBP11.87□□□□□ -0.51
SNX13-202ENST00000409604 CNPY3Q9BT09 278 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 FTHL17Q9BXU8 183 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 UBE2OQ9C0C9 1292 aaKnown RBP11.87□□□□□ -0.51
SNX13-202ENST00000409604 GIT1Q9Y2X7 761 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 CLGNO14967 610 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 LTFP02788 710 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 GZMAP12544 262 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 CYBAP13498 195 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 EN2P19622 333 aaPredicted RBP11.87□□□□□ -0.51
SNX13-202ENST00000409604 KYNUQ16719 465 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 TMC5Q6UXY8 1006 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 SRRM1Q8IYB3 904 aaKnown RBP11.87□□□□□ -0.51
SNX13-202ENST00000409604 RCOR2Q8IZ40 523 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 NAT16Q8N8M0 369 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 MAB21L3Q8N8X9 362 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 SLC13A1Q9BZW2 595 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 TBC1D13Q9NVG8 400 aa11.87□□□□□ -0.51
SNX13-202ENST00000409604 NDUFAB1O14561 156 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 PROSCO94903 275 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 TBX18O95935 607 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 HDCP19113 662 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 PHBP35232 272 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 FLT3P36888 993 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 ELAVL2Q12926 359 aaKnown RBP11.86□□□□□ -0.51
SNX13-202ENST00000409604 GRIK3Q13003 919 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 PTK7Q13308 1070 aa11.86□□□□□ -0.51
SNX13-202ENST00000409604 PPM1LQ5SGD2 360 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms