RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 NGRNQ9NPE2 291 aaKnown RBP16.43■□□□□ 0.22
SHANK2-204ENST00000409530 MRPL17Q9NRX2 175 aaKnown RBP16.43■□□□□ 0.22
SHANK2-204ENST00000409530 PCSK1NQ9UHG2 260 aa16.43■□□□□ 0.22
SHANK2-204ENST00000409530 MAGED2Q9UNF1 606 aaPredicted RBP16.43■□□□□ 0.22
SHANK2-204ENST00000409530 YJEFN3A6XGL0 299 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 E7ENQ6 273 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 GPD1P21695 349 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 DSG1Q02413 1049 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 GPR17Q13304 367 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 MTMR3Q13615 1198 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 SMYD5Q6GMV2 418 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 ADAT2Q7Z6V5 191 aaKnown RBP16.42■□□□□ 0.22
SHANK2-204ENST00000409530 ADAM32Q8TC27 787 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 PHOSPHO2Q8TCD6 241 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 ALG3Q92685 438 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 CSNK1G1Q9HCP0 422 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.42■□□□□ 0.22
SHANK2-204ENST00000409530 V9GYY5 206 aaPredicted RBP16.42■□□□□ 0.22
SHANK2-204ENST00000409530 EFEMP2O95967 443 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 MRPS5P82675 430 aaKnown RBP16.42■□□□□ 0.22
SHANK2-204ENST00000409530 TCEAL1Q15170 157 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 CFAP221Q4G0U5 840 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 DCAF6Q58WW2 860 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 CCDC181Q5TID7 509 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 PAPD7Q5XG87 772 aaKnown RBP16.42■□□□□ 0.22
SHANK2-204ENST00000409530 CLP1Q92989 425 aaKnown RBP16.42■□□□□ 0.22
SHANK2-204ENST00000409530 TCF25Q9BQ70 676 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 ABCB6Q9NP58 842 aa16.42■□□□□ 0.22
SHANK2-204ENST00000409530 CEP104O60308 925 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 TBC1D4O60343 1298 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 ZBED1O96006 694 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 SDC4P31431 198 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 ATXN1P54253 815 aaKnown RBP16.41■□□□□ 0.22
SHANK2-204ENST00000409530 USP46P62068 366 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 PITX1P78337 314 aaPredicted RBP16.41■□□□□ 0.22
SHANK2-204ENST00000409530 TAP1Q03518 808 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 KCNT1Q5JUK3 1230 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 DCAF12L1Q5VU92 463 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 TXNRD3NBQ6F5E7 133 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 CC2D1AQ6P1N0 951 aaPredicted RBP16.41■□□□□ 0.22
SHANK2-204ENST00000409530 SCYL2Q6P3W7 929 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 DEFB106AQ8N104 65 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 KCTD13Q8WZ19 329 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 HES6Q96HZ4 224 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 CYP4F11Q9HBI6 524 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 CDC23Q9UJX2 597 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 TMEM59LQ9UK28 342 aa16.41■□□□□ 0.22
SHANK2-204ENST00000409530 C2CD4BA6NLJ0 364 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 H0YGN5 161 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 CAPN9O14815 690 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 DDX3YO15523 660 aaKnown RBP16.4■□□□□ 0.22
SHANK2-204ENST00000409530 GSCP56915 257 aaPredicted RBP16.4■□□□□ 0.22
SHANK2-204ENST00000409530 DAOAP59103 153 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 ATP13A4Q4VNC1 1196 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 SLC8B1Q6J4K2 584 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 CCDC50Q8IVM0 306 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 UBL4BQ8N7F7 174 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 SP7Q8TDD2 431 aaPredicted RBP16.4■□□□□ 0.22
SHANK2-204ENST00000409530 MICAL1Q8TDZ2 1067 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 FAM172AQ8WUF8 416 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 ZBP1Q9H171 429 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 NUDT5Q9UKK9 219 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 NAALADL1Q9UQQ1 740 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 PI4K2BG5E9Z4 385 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 TEX28O15482 410 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 DNAJB1P25685 340 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 BMPR1AP36894 532 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 SULT1E1P49888 294 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 ERVFC1P60507 584 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 KCTD19Q17RG1 926 aaPredicted RBP16.4■□□□□ 0.22
SHANK2-204ENST00000409530 RASIP1Q5U651 963 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 SLC26A9Q7LBE3 791 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 ZDHHC17Q8IUH5 632 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 MNS1Q8NEH6 495 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 SPPL2BQ8TCT7 592 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 KHSRPQ92945 711 aaKnown RBP eCLIP16.4■□□□□ 0.226e-7■■■□□ 16.4
SHANK2-204ENST00000409530 FUBP3Q96I24 572 aaKnown RBP eCLIP16.4■□□□□ 0.22
SHANK2-204ENST00000409530 ADAM33Q9BZ11 813 aa16.4■□□□□ 0.22
SHANK2-204ENST00000409530 YBX2Q9Y2T7 364 aaKnown RBP16.4■□□□□ 0.22
SHANK2-204ENST00000409530 SZT2Q5T011 3432 aa16.39■□□□□ 0.22
SHANK2-204ENST00000409530 PRRG1O14668 218 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 TRIM66O15016 1216 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 LRCH4O75427 683 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 CAPN15O75808 1086 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 SEC24AO95486 1093 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 NCAM1P13591 858 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 ATF6P18850 670 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 PGFP49763 221 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 NME3Q13232 169 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 SMC1AQ14683 1233 aaKnown RBP16.39■□□□□ 0.21
SHANK2-204ENST00000409530 CCDC14Q49A88 953 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 RAB41Q5JT25 222 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 SYPL2Q5VXT5 272 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 POF1BQ8WVV4 589 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 HSPH1Q92598 858 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 BACE2Q9Y5Z0 518 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 MYO7AQ13402 2215 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 HIDE1A8MVS5 230 aa16.39■□□□□ 0.21
SHANK2-204ENST00000409530 PDE2AO00408 941 aaPredicted RBP16.39■□□□□ 0.21
SHANK2-204ENST00000409530 HSF2BPO75031 334 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms