RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ESRRBO95718 433 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 CXCL17Q6UXB2 119 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 LRRC52Q8N7C0 313 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 APBB2Q92870 758 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 C18orf25Q96B23 403 aaPredicted RBP17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 ZNF558Q96NG5 402 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 KDM4CQ9H3R0 1056 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 SERPINB4P48594 390 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 ARFIP2P53365 341 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 MAPK7Q13164 816 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 THEMIS2Q5TEJ8 643 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 PGBD3Q8N328 593 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 ETNK1Q9HBU6 452 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 ANGPTL2Q9UKU9 493 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 CNTNAP2Q9UHC6 1331 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 DUOX1Q9NRD9 1551 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 PRKAR2AP13861 404 aaKnown RBP17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 GFAPP14136 432 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 FAM171A1Q5VUB5 890 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 PPWD1Q96BP3 646 aaKnown RBP17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 L3MBTL3Q96JM7 780 aaPredicted RBP17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 XPO6Q96QU8 1125 aaKnown RBP17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 POP1Q99575 1024 aaKnown RBP17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 CYP4F11Q9HBI6 524 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 PCDHGB4Q9UN71 923 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 IGKV6D-41A0A0C4DH26 115 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 BTBD19C9JJ37 291 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 DUSP11O75319 330 aaKnown RBP17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 CHN1P15882 459 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 MAP3K7CLP57077 242 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 FBXW10Q5XX13 1052 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 USP33Q8TEY7 942 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 TRAPPC12Q8WVT3 735 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 WHRNQ9P202 907 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 GYG2O15488 501 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 FAM107AO95990 144 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 POMCP01189 267 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 ERBB2P04626 1255 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 PRKCIP41743 596 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 NCKAP1LP55160 1127 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 USP10Q14694 798 aaKnown RBP17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 PTRHD1Q6GMV3 140 aaKnown RBP17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 PRUNE1Q86TP1 453 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 ZFP69BQ9UJL9 534 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 GRID1Q9ULK0 1009 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 NR2C2P49116 596 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 CNGA2Q16280 664 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 ZNF571Q7Z3V5 609 aaPredicted RBP17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 NOP9Q86U38 636 aaKnown RBP17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 OXCT2Q9BYC2 517 aaPredicted RBP17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 ECT2Q9H8V3 914 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 PCDHAC2Q9Y5I4 1007 aa17.41■□□□□ 0.38
PCDHA13-202ENST00000409494 AHDC1Q5TGY3 1603 aaPredicted RBP17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 SF3B1O75533 1304 aaKnown RBP eCLIP17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 RHOCP08134 193 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 GRM5P41594 1212 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 SEC24CP53992 1094 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 AMHR2Q16671 573 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 IPMKQ8NFU5 416 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 DNAJC19Q96DA6 116 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 TRIM4Q9C037 500 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 CDH9Q9ULB4 789 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 L3MBTL1Q9Y468 752 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 ATMINO43313 823 aaPredicted RBP17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 BEX3Q00994 111 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 MIB1Q86YT6 1006 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 SENP8Q96LD8 212 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 DMGDHQ9UI17 866 aaKnown RBP17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 A0A0G2JLL6 359 aaPredicted RBP17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 MAGEB16A2A368 324 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 PHF20L1A8MW92 1017 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 SLC9A3R1O14745 358 aaPredicted RBP17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 NFIL3Q16649 462 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 PRRT2Q7Z6L0 340 aaPredicted RBP17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 VAT1Q99536 393 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 ACO2Q99798 780 aaKnown RBP17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 ARHGAP20Q9P2F6 1191 aa17.4■□□□□ 0.38
PCDHA13-202ENST00000409494 FLT3LGP49771 235 aa17.39■□□□□ 0.38
PCDHA13-202ENST00000409494 ABHD15Q6UXT9 468 aa17.39■□□□□ 0.38
PCDHA13-202ENST00000409494 NLRP9Q7RTR0 991 aa17.39■□□□□ 0.38
PCDHA13-202ENST00000409494 BTBD6Q96KE9 485 aa17.39■□□□□ 0.38
PCDHA13-202ENST00000409494 PRMT1Q99873 361 aaKnown RBP17.39■□□□□ 0.38
PCDHA13-202ENST00000409494 C20orf96Q9NUD7 363 aaPredicted RBP17.39■□□□□ 0.38
PCDHA13-202ENST00000409494 FARP2O94887 1054 aaPredicted RBP17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 HAUS5O94927 633 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 EFEMP1Q12805 493 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 SMTNL2Q2TAL5 461 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 ERMARDQ5T6L9 678 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 SPOCD1Q6ZMY3 1216 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 ANKS3Q6ZW76 656 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 CDC26Q8NHZ8 85 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 RSPH1Q8WYR4 309 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 LRRC40Q9H9A6 602 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 TBC1D13Q9NVG8 400 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 TCP11X1B4DZS4 312 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 H0Y3Z8 333 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 KRT16P08779 473 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 KLRC2P26717 231 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 SPATA21Q7Z572 469 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 TATDN2Q93075 761 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms