RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 CPNE8Q86YQ8 564 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 AGGF1Q8N302 714 aaeCLIP17.09■□□□□ 0.335e-7■■■■■ 56.1
PTPRN2-205ENST00000409483 PPHLN1Q8NEY8 458 aaKnown RBP17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 TCP10LQ8TDR4 215 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 MAGEB18Q96M61 343 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 C17orf102A2RUQ5 167 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 CCDC130P13994 396 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 SERPINB9P50453 376 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 ADIGQ0VDE8 80 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 DCAF4L1Q3SXM0 396 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 MTHFD1LQ6UB35 978 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 IFNEQ86WN2 208 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 SLC2A14Q8TDB8 520 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 TMEM237Q96Q45 408 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 MAGEB5Q9BZ81 275 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 ARHGEF38Q9NXL2 777 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 SLC4A7Q9Y6M7 1214 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 C2CD2LO14523 706 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 SPAG6O75602 509 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 ABCG1P45844 678 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 OAZ1P54368 228 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 ANKRD20A4Q4UJ75 823 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 ANKRD20A8PQ5CZ79 823 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 ANKRD20A2Q5SQ80 823 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 ANKRD20A1Q5TYW2 823 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 PACS2Q86VP3 889 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 ZNF512Q96ME7 567 aaPredicted RBP17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 KATNAL1Q9BW62 490 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 DONSONQ9NYP3 566 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 GOLGA8TH3BQL2 631 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 POMCP01189 267 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 BCAT1P54687 386 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 RPL10AP62906 217 aaKnown RBP17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 MMRN1Q13201 1228 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 NUDT5Q9UKK9 219 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 UMODL1Q5DID0 1318 aa17.09■□□□□ 0.33
PTPRN2-205ENST00000409483 TRAPPC3O43617 180 aa17.08■□□□□ 0.33
PTPRN2-205ENST00000409483 HMGCRP04035 888 aa17.08■□□□□ 0.33
PTPRN2-205ENST00000409483 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.08■□□□□ 0.33
PTPRN2-205ENST00000409483 DUPD1Q68J44 220 aa17.08■□□□□ 0.33
PTPRN2-205ENST00000409483 GLB1LQ6UWU2 654 aa17.08■□□□□ 0.33
PTPRN2-205ENST00000409483 C12orf29Q8N999 325 aa17.08■□□□□ 0.33
PTPRN2-205ENST00000409483 KAT2BQ92831 832 aa17.08■□□□□ 0.33
PTPRN2-205ENST00000409483 EGFL8Q99944 293 aa17.08■□□□□ 0.33
PTPRN2-205ENST00000409483 XAB2Q9HCS7 855 aaKnown RBP17.08■□□□□ 0.33
PTPRN2-205ENST00000409483 PDGFCQ9NRA1 345 aa17.08■□□□□ 0.33
PTPRN2-205ENST00000409483 WDR70Q9NW82 654 aa17.08■□□□□ 0.33
PTPRN2-205ENST00000409483 CYP1A2P05177 515 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 NQO1P15559 274 aaKnown RBP17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 ADRA1DP25100 572 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 RBL1P28749 1068 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 SLC26A2P50443 739 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 TKTL1P51854 596 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 NDFIP2Q9NV92 336 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 DCDC2CA8MYV0 355 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 KIF3CO14782 793 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 IRF1P10914 325 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 BEX3Q00994 111 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 AUHQ13825 339 aaKnown RBP17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 EFTUD2Q15029 972 aaKnown RBP eCLIP17.08■□□□□ 0.321e-6■■■□□ 16.9
PTPRN2-205ENST00000409483 FAM182AQ5T1J6 154 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 R3HDM2Q9Y2K5 976 aaKnown RBP17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 ZNF862O60290 1169 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 LGALS2P05162 132 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 CRADDP78560 199 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 IQCKQ8N0W5 287 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 C3orf20Q8ND61 904 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 SLC38A7Q9NVC3 462 aa17.08■□□□□ 0.32
PTPRN2-205ENST00000409483 SKOR1P84550 965 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 ANGPTL8Q6UXH0 198 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 VCPIP1Q96JH7 1222 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 TRPC7Q9HCX4 862 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 MTO1Q9Y2Z2 717 aaKnown RBP17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 NCANO14594 1321 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 RBAK-RBAKDNI3L0D1 243 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 HADHAP40939 763 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 AQP5P55064 265 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 NOMO3P69849 1222 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 ZCCHC23Q6ZST2 131 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 TRIML2Q8N7C3 387 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 RAET1EQ8TD07 263 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 ZBED2Q9BTP6 218 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 L3MBTL1Q9Y468 752 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 RNF103-CHMP3A0A140T963 221 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 SKAP2O75563 359 aaPredicted RBP17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 NCKAP1LP55160 1127 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 PDK2Q15119 407 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 SLC26A11Q86WA9 606 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 COLGALT1Q8NBJ5 622 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 PGM2Q96G03 612 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 NSL1Q96IY1 281 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 CDT1Q9H211 546 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 CYP3A43Q9HB55 503 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 GPRC5DQ9NZD1 345 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 SYNPO2Q9UMS6 1093 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 SHOC2Q9UQ13 582 aa17.07■□□□□ 0.32
PTPRN2-205ENST00000409483 TBC1D12O60347 775 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 MT-CO1P00395 513 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms