RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 XYLT1Q86Y38 959 aa21.54■■□□□ 1.04
VSX1-203ENST00000409285 SIX6OS1Q8N1H7 587 aa21.54■■□□□ 1.04
VSX1-203ENST00000409285 SFXN1Q9H9B4 322 aa21.54■■□□□ 1.04
VSX1-203ENST00000409285 PCDHA13Q9Y5I0 950 aa21.54■■□□□ 1.04
VSX1-203ENST00000409285 SPTBN5Q9NRC6 3674 aaKnown RBP21.54■■□□□ 1.04
VSX1-203ENST00000409285 PAPSS1O43252 624 aaPredicted RBP21.53■■□□□ 1.04
VSX1-203ENST00000409285 SART1O43290 800 aaKnown RBP21.53■■□□□ 1.04
VSX1-203ENST00000409285 H2AFZP0C0S5 128 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 HMGA1P17096 107 aaKnown RBP21.53■■□□□ 1.04
VSX1-203ENST00000409285 GTF2F1P35269 517 aaKnown RBP eCLIP21.53■■□□□ 1.04
VSX1-203ENST00000409285 GALCP54803 685 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 ZNF268Q14587 947 aaPredicted RBP21.53■■□□□ 1.04
VSX1-203ENST00000409285 CTC1Q2NKJ3 1217 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 SDHAF4Q5VUM1 108 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 OLFML1Q6UWY5 402 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 TOGARAM2Q6ZUX3 1019 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 H2AFVQ71UI9 128 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 C3orf20Q8ND61 904 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 IRGQQ8WZA9 623 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 MCRS1Q96EZ8 462 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 AVENQ9NQS1 362 aaPredicted RBP21.53■■□□□ 1.04
VSX1-203ENST00000409285 TJP2Q9UDY2 1190 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 SCML2Q9UQR0 700 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 ADGRG1Q9Y653 693 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 C5orf42Q9H799 3197 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 PRUNE2Q8WUY3 3088 aa21.53■■□□□ 1.04
VSX1-203ENST00000409285 NUP210Q8TEM1 1887 aaPredicted RBP21.53■■□□□ 1.04
VSX1-203ENST00000409285 TCRBV5S1A1TA0A578 114 aa21.52■■□□□ 1.04
VSX1-203ENST00000409285 ZBED1O96006 694 aa21.52■■□□□ 1.04
VSX1-203ENST00000409285 TMEM253P0C7T8 217 aa21.52■■□□□ 1.04
VSX1-203ENST00000409285 MAGEA1P43355 309 aa21.52■■□□□ 1.04
VSX1-203ENST00000409285 USP46P62068 366 aa21.52■■□□□ 1.04
VSX1-203ENST00000409285 ELMOD1Q8N336 334 aa21.52■■□□□ 1.04
VSX1-203ENST00000409285 TXLNBQ8N3L3 684 aa21.52■■□□□ 1.04
VSX1-203ENST00000409285 ACRBPQ8NEB7 543 aa21.52■■□□□ 1.04
VSX1-203ENST00000409285 SCAMP5Q8TAC9 235 aa21.52■■□□□ 1.04
VSX1-203ENST00000409285 OVCA2Q8WZ82 227 aa21.52■■□□□ 1.04
VSX1-203ENST00000409285 ZNF830Q96NB3 372 aaPredicted RBP21.52■■□□□ 1.04
VSX1-203ENST00000409285 ASNSD1Q9NWL6 643 aa21.52■■□□□ 1.04
VSX1-203ENST00000409285 UXTQ9UBK9 157 aaPredicted RBP21.52■■□□□ 1.04
VSX1-203ENST00000409285 LCP1P13796 627 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 VAV2P52735 878 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 DAOAP59103 153 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 MRPS5P82675 430 aaKnown RBP21.52■■□□□ 1.03
VSX1-203ENST00000409285 ADAM15Q13444 863 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 CYP4A22Q5TCH4 519 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 LLGL2Q6P1M3 1020 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 FAM183BPQ6ZVS7 135 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 SLC26A9Q7LBE3 791 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 ARCQ7LC44 396 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 BHLHA9Q7RTU4 235 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 DNAJB7Q7Z6W7 309 aaPredicted RBP21.52■■□□□ 1.03
VSX1-203ENST00000409285 SCUBE3Q8IX30 993 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 GPR152Q8TDT2 470 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 GIPC2Q8TF65 315 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 CTNNBL1Q8WYA6 563 aaPredicted RBP21.52■■□□□ 1.03
VSX1-203ENST00000409285 ULBP1Q9BZM6 244 aa21.52■■□□□ 1.03
VSX1-203ENST00000409285 COL6A3P12111 3177 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 PJA2O43164 708 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 XYLBO75191 536 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 RFPL2O75678 378 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 GLI1P08151 1106 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 CCDC175P0C221 793 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 HOXB8P17481 243 aaPredicted RBP21.51■■□□□ 1.03
VSX1-203ENST00000409285 RRM1P23921 792 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 YWHAQP27348 245 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 EPHA5P54756 1037 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 GPC5P78333 572 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 RBM10P98175 930 aaKnown RBP21.51■■□□□ 1.03
VSX1-203ENST00000409285 SLC6A3Q01959 620 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 TCEAL1Q15170 157 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 PLEKHA7Q6IQ23 1121 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 ZNF662Q6ZS27 426 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 LEMD2Q8NC56 503 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 PDZD8Q8NEN9 1154 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 ZNF707Q96C28 371 aaPredicted RBP21.51■■□□□ 1.03
VSX1-203ENST00000409285 ZNF653Q96CK0 615 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 ZNF512Q96ME7 567 aaPredicted RBP21.51■■□□□ 1.03
VSX1-203ENST00000409285 DESI2Q9BSY9 194 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 PACSIN1Q9BY11 444 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 PRKD2Q9BZL6 878 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 THAP2Q9H0W7 228 aa21.51■■□□□ 1.03
VSX1-203ENST00000409285 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.51■■□□□ 1.03
VSX1-203ENST00000409285 CYP1A2P05177 515 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 ZDHHC11BP0C7U3 371 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 PPP3CCP48454 512 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 PSEN1P49768 467 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 MTMR3Q13615 1198 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 C2CD6Q53TS8 623 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 PPP1R15BQ5SWA1 713 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 SNX30Q5VWJ9 437 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 BEND5Q7L4P6 421 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 MON1AQ86VX9 555 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 DNAAF5Q86Y56 855 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 STKLD1Q8NE28 680 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 SLITRK1Q96PX8 696 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 TRIM62Q9BVG3 475 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 LRRC3Q9BY71 257 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 IGFLR1Q9H665 355 aa21.5■■□□□ 1.03
VSX1-203ENST00000409285 PARVAQ9NVD7 372 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms