RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 CARD9Q9H257 536 aa14.67□□□□□ -0.06
ITGA6-202ENST00000409080 AKAP7Q9P0M2 348 aaPredicted RBP14.67□□□□□ -0.06
ITGA6-202ENST00000409080 AKAP3O75969 853 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 APOA4P06727 396 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 TTI2Q6NXR4 508 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 ZNF669Q96BR6 464 aaPredicted RBP14.66□□□□□ -0.06
ITGA6-202ENST00000409080 PPP1R16AQ96I34 528 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 NAT9Q9BTE0 207 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 ABCC13Q9NSE7 274 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 SPG21Q9NZD8 308 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 DDX20Q9UHI6 824 aaKnown RBP14.66□□□□□ -0.06
ITGA6-202ENST00000409080 ST3GAL5Q9UNP4 418 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 VPS26AO75436 327 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 ATP5HO75947 161 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 CYP2A6P11509 494 aaPredicted RBP14.66□□□□□ -0.06
ITGA6-202ENST00000409080 POLR2EP19388 210 aaKnown RBP14.66□□□□□ -0.06
ITGA6-202ENST00000409080 ADIGQ0VDE8 80 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 IFT88Q13099 833 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 FBXO22Q8NEZ5 403 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 SEMA6BQ9H3T3 888 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 KCNMB3Q9NPA1 279 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 PSMC3IPQ9P2W1 217 aaPredicted RBP14.66□□□□□ -0.06
ITGA6-202ENST00000409080 LNPEPQ9UIQ6 1025 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 CDH9Q9ULB4 789 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 PLAGL2Q9UPG8 496 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 CCDC195A0A1B0GUA6 201 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 CYTH3O43739 400 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 E2F6O75461 281 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 MRPS25P82663 173 aaKnown RBP14.66□□□□□ -0.06
ITGA6-202ENST00000409080 SMARCB1Q12824 385 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 TFDP3Q5H9I0 405 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 SPDYAQ5MJ70 313 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 FAM131BQ86XD5 332 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 PALB2Q86YC2 1186 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 RXFP2Q8WXD0 754 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 ATRNO75882 1429 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 LRRIQ3A6PVS8 624 aaPredicted RBP14.66□□□□□ -0.06
ITGA6-202ENST00000409080 C5orf58C9J3I9 102 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 RBAK-RBAKDNI3L0D1 243 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 ATP5C1P36542 298 aaKnown RBP14.66□□□□□ -0.06
ITGA6-202ENST00000409080 AARSP49588 968 aaKnown RBP eCLIP14.66□□□□□ -0.06
ITGA6-202ENST00000409080 FAM71DQ8N9W8 422 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 MIPOL1Q8TD10 442 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 HELQQ8TDG4 1101 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 PRDM16Q9HAZ2 1276 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 ATP13A1Q9HD20 1204 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 USP18Q9UMW8 372 aa14.66□□□□□ -0.06
ITGA6-202ENST00000409080 SEPT4O43236 478 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 DYRK3O43781 588 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 FNTAP49354 379 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 SH3BGRP55822 239 aaPredicted RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 FNDC3BQ53EP0 1204 aaKnown RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 NOL9Q5SY16 702 aaKnown RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 VCPIP1Q96JH7 1222 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 ZSWIM1Q9BR11 485 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 APOL5Q9BWW9 433 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 THAP2Q9H0W7 228 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 EML1O00423 815 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 CD52P31358 61 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 GRK3P35626 688 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 SESN3P58005 492 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 CLEC16AQ2KHT3 1053 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 CCDC157Q569K6 752 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 PHACTR4Q8IZ21 702 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 PNMA5Q96PV4 448 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 PRPF18Q99633 342 aaKnown RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 OXCT2Q9BYC2 517 aaPredicted RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 CLPBQ9H078 707 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 TASP1Q9H6P5 420 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 MEIS2O14770 477 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 CCDC22O60826 627 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 CDH16O75309 829 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 MMP3P08254 477 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 GTF2A1P52655 376 aaPredicted RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 C18orf25Q96B23 403 aaPredicted RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 CCDC138Q96M89 665 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 UBE2OQ9C0C9 1292 aaKnown RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 SMPD4Q9NXE4 827 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 ANGPTL2Q9UKU9 493 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 CLASP2O75122 1294 aaKnown RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 SRP72O76094 671 aaKnown RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 GYPCP04921 128 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 SERPINF2P08697 491 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 GLRA2P23416 452 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 RTP1P59025 263 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 POLR2LP62875 67 aaKnown RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 SMAD1Q15797 465 aaKnown RBP14.65□□□□□ -0.06
ITGA6-202ENST00000409080 HECTD3Q5T447 861 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 MARC1Q5VT66 337 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 FAM167BQ9BTA0 163 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 RIC8BQ9NVN3 520 aa14.65□□□□□ -0.06
ITGA6-202ENST00000409080 CCDC78A2IDD5 438 aa14.64□□□□□ -0.07
ITGA6-202ENST00000409080 OR6C75A6NL08 312 aa14.64□□□□□ -0.07
ITGA6-202ENST00000409080 F8VZ95 297 aa14.64□□□□□ -0.07
ITGA6-202ENST00000409080 KRT16P08779 473 aa14.64□□□□□ -0.07
ITGA6-202ENST00000409080 MYL2P10916 166 aa14.64□□□□□ -0.07
ITGA6-202ENST00000409080 PDCLQ13371 301 aa14.64□□□□□ -0.07
ITGA6-202ENST00000409080 SLC2A14Q8TDB8 520 aa14.64□□□□□ -0.07
ITGA6-202ENST00000409080 LTBP3Q9NS15 1303 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms