RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CD58P19256 250 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 ADORA2BP29275 332 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 PGFP49763 221 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 PMS1P54277 932 aaKnown RBP20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 LPAL2Q16609 132 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 PDZD8Q8NEN9 1154 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 SPATA20Q8TB22 786 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 WHAMMQ8TF30 809 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 OVCA2Q8WZ82 227 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 CYP3A43Q9HB55 503 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 CSNK1G1Q9HCP0 422 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 GMIPQ9P107 970 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 CFAP97Q9P2B7 532 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 KIAA1549LQ6ZVL6 1849 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 CETN3O15182 167 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 HRO43593 1189 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 MBL2P11226 248 aaPredicted RBP20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 DRD1P21728 446 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 GTF2H1P32780 548 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 KRT39Q6A163 491 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 ANKRD40Q6AI12 368 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 CD101Q93033 1021 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 CCSER2Q9H7U1 834 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 FAM92AA1XBS5 289 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 CILPO75339 1184 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 SMC2O95347 1197 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 NFATC1O95644 943 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 EPB41P11171 864 aaKnown RBP20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 NR1H3Q13133 447 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 GAB4Q2WGN9 574 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 COBLL1Q53SF7 1204 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 HECTD3Q5T447 861 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 SNX30Q5VWJ9 437 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 GPRIN1Q7Z2K8 1008 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 LONP2Q86WA8 852 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 ADGRG2Q8IZP9 1017 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 SMARCE1Q969G3 411 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 ZFRQ96KR1 1074 aaKnown RBP20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 HNRNPABQ99729 332 aaKnown RBP20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 NT5C1AQ9BXI3 368 aa20.42■□□□□ 0.86
SMARCB1-204ENST00000407422 TRIM49BA6NDI0 452 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 ZDHHC11BP0C7U3 371 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 FAM200BP0CF97 657 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 PXNP49023 591 aaPredicted RBP20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 MXI1P50539 228 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 EML5Q05BV3 1969 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 ISM2Q6H9L7 571 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 PRR23BQ6ZRT6 265 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 CLEC20AQ6ZU45 233 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 CCDC150Q8NCX0 1101 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 JAKMIP2Q96AA8 810 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 CYFIP2Q96F07 1278 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 TIGD1Q96MW7 591 aa20.41■□□□□ 0.86
SMARCB1-204ENST00000407422 HHLA1C9JL84 531 aa20.4■□□□□ 0.86
SMARCB1-204ENST00000407422 CYP17A1P05093 508 aa20.4■□□□□ 0.86
SMARCB1-204ENST00000407422 HOXA6P31267 233 aa20.4■□□□□ 0.86
SMARCB1-204ENST00000407422 OPRD1P41143 372 aa20.4■□□□□ 0.86
SMARCB1-204ENST00000407422 ZNF394Q53GI3 561 aa20.4■□□□□ 0.86
SMARCB1-204ENST00000407422 ZC3H3Q8IXZ2 948 aaKnown RBP20.4■□□□□ 0.86
SMARCB1-204ENST00000407422 FBXL13Q8NEE6 735 aa20.4■□□□□ 0.86
SMARCB1-204ENST00000407422 ARID3AQ99856 593 aa20.4■□□□□ 0.86
SMARCB1-204ENST00000407422 COMMD8Q9NX08 183 aa20.4■□□□□ 0.86
SMARCB1-204ENST00000407422 SPAG17Q6Q759 2223 aa20.4■□□□□ 0.86
SMARCB1-204ENST00000407422 RALGAPA1Q6GYQ0 2036 aa20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 ANTXRLA6NF34 631 aa20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 ATG13O75143 517 aa20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 ID4P47928 161 aa20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 SIM2Q14190 667 aaPredicted RBP20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 CBWD6Q4V339 395 aa20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 DCAF17Q5H9S7 520 aaPredicted RBP20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 CBWD3Q5JTY5 395 aa20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 CBWD5Q5RIA9 395 aa20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 RPLP0P6Q8NHW5 317 aa20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 EXOC4Q96A65 974 aa20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 TSG101Q99816 390 aa20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 RAB20Q9NX57 234 aa20.39■□□□□ 0.86
SMARCB1-204ENST00000407422 TUBP50607 506 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 FKBP3Q00688 224 aaKnown RBP20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 DHCR24Q15392 516 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 FBXO43Q4G163 708 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 TCERG1LQ5VWI1 586 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 RHBDF2Q6PJF5 856 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 KIAA1958Q8N8K9 716 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 TATDN2Q93075 761 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 WBP2Q969T9 261 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 RMDN1Q96DB5 314 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 FBXO44Q9H4M3 255 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 RAB23Q9ULC3 237 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 SLC8A2Q9UPR5 921 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 CACNA1AO00555 2505 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 SLC9A3R1O14745 358 aaPredicted RBP20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 SLC16A3O15427 465 aaKnown RBP20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 CYP26A1O43174 497 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 GADD45BO75293 160 aaPredicted RBP20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 TBX18O95935 607 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 TRIM21P19474 475 aaKnown RBP20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 TGM1P22735 817 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 PPP1R26Q5T8A7 1209 aaPredicted RBP20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 WDR5BQ86VZ2 330 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 DDX42Q86XP3 938 aaKnown RBP eCLIP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms