RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 SHBGP04278 402 aa30.33■■■□□ 2.45
CSNK1E-205ENST00000405675 ZSCAN5DPP0CG00 497 aa30.33■■■□□ 2.45
CSNK1E-205ENST00000405675 ETS1P14921 441 aa30.33■■■□□ 2.45
CSNK1E-205ENST00000405675 ATN1P54259 1190 aaPredicted RBP30.33■■■□□ 2.45
CSNK1E-205ENST00000405675 CCDC25Q86WR0 208 aa30.33■■■□□ 2.45
CSNK1E-205ENST00000405675 ALLCQ8N6M5 410 aa30.33■■■□□ 2.45
CSNK1E-205ENST00000405675 SLC35B2Q8TB61 432 aa30.33■■■□□ 2.45
CSNK1E-205ENST00000405675 NKD2Q969F2 451 aaPredicted RBP30.33■■■□□ 2.45
CSNK1E-205ENST00000405675 DRG1Q9Y295 367 aaKnown RBP30.33■■■□□ 2.45
CSNK1E-205ENST00000405675 A0A0U1RQF3 1178 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 HSPA8P11142 646 aaKnown RBP30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 PTPN1P18031 435 aaKnown RBP30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 TFE3P19532 575 aaPredicted RBP30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 MNX1P50219 401 aaPredicted RBP30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 DNAJC21Q5F1R6 531 aaKnown RBP30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 PAQR9Q6ZVX9 377 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 ZDHHC17Q8IUH5 632 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 CCDC89Q8N998 374 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 FAM172AQ8WUF8 416 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 HNRNPABQ99729 332 aaKnown RBP30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 NGRNQ9NPE2 291 aaKnown RBP30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 STAU2Q9NUL3 570 aaKnown RBP eCLIP30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 ANAPC5Q9UJX4 755 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 PQBP1O60828 265 aaKnown RBP30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 ZNF623O75123 536 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 MYZAPP0CAP1 466 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 ARSEP51690 589 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 SNX16P57768 344 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 MMRN1Q13201 1228 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 LRRC8DQ7L1W4 858 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 ACTL9Q8TC94 416 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 ZNF333Q96JL9 665 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 PWWP2AQ96N64 755 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 CENPHQ9H3R5 247 aa30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 TIMM13Q9Y5L4 95 aaPredicted RBP30.32■■■□□ 2.44
CSNK1E-205ENST00000405675 RARGP13631 454 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 SDC4P31431 198 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 OTUD4Q01804 1114 aaKnown RBP30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 LMNB2Q03252 620 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 RFX6Q8HWS3 928 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 CALN1Q9BXU9 219 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 ADAM33Q9BZ11 813 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 CRISPLD2Q9H0B8 497 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 C10orf88Q9H8K7 445 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 GPATCH2LQ9NWQ4 482 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 PRPSAP2O60256 369 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 ENDOD1O94919 500 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 SELPP16109 830 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 RAB27AP51159 221 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 SLMAPQ14BN4 828 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 IZUMO3Q5VZ72 239 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 TMEM121Q9BTD3 319 aa30.31■■■□□ 2.44
CSNK1E-205ENST00000405675 BEST1O76090 585 aa30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 NUDT17P0C025 328 aa30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 CDH6P55285 790 aa30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 SLC29A2Q14542 456 aa30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 MDH1BQ5I0G3 518 aa30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 SCYL2Q6P3W7 929 aa30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 FBXO46Q6PJ61 603 aaPredicted RBP30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 SLC26A9Q7LBE3 791 aa30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 RTN4RL1Q86UN2 441 aaPredicted RBP30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 PIGZQ86VD9 579 aa30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 DNAI2Q9GZS0 605 aa30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 CRTAC1Q9NQ79 661 aa30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 DDX43Q9NXZ2 648 aaKnown RBP30.3■■■□□ 2.44
CSNK1E-205ENST00000405675 GOLGA6L10A6NI86 522 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 FAM163BP0C2L3 166 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 P3H1Q32P28 736 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 DENND2CQ68D51 928 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 HSFY1Q96LI6 401 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 DUSP16Q9BY84 665 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 RSAD1Q9HA92 442 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 CYLDQ9NQC7 956 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 DNAJC17Q9NVM6 304 aaKnown RBP30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 XPO1O14980 1071 aaKnown RBP30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 POMCP01189 267 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 ITGAVP06756 1048 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 PECAM1P16284 738 aaPredicted RBP30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 HDAC4P56524 1084 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 PLCB3Q01970 1234 aa30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 NDRG1Q92597 394 aaKnown RBP30.29■■■□□ 2.44
CSNK1E-205ENST00000405675 RIPK2O43353 540 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 LBX1P52954 281 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 BFSP2Q13515 415 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 DPYSL3Q14195 570 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 UPP1Q16831 310 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 ZC3H12AQ5D1E8 599 aaKnown RBP30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 UHMK1Q8TAS1 419 aaKnown RBP30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 ADAM7Q9H2U9 754 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 HMGB1P1B2RPK0 211 aaPredicted RBP30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 ACADSBP45954 432 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 CAV1Q03135 178 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 IFFO1Q0D2I5 559 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 KRT71Q3SY84 523 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 DSTYKQ6XUX3 929 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 SLC39A5Q6ZMH5 540 aa30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 C11orf84Q9BUA3 381 aaPredicted RBP30.28■■■□□ 2.44
CSNK1E-205ENST00000405675 GPNMBQ14956 572 aa30.27■■■□□ 2.44
CSNK1E-205ENST00000405675 CA9Q16790 459 aa30.27■■■□□ 2.44
CSNK1E-205ENST00000405675 ECHDC2Q86YB7 292 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms