RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 BDNFP23560 247 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 FSHRP23945 695 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 TARSP26639 723 aaKnown RBP11.16□□□□□ -0.62
RPAIN-204ENST00000405578 GRIK1P39086 918 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 MAGEA11P43364 429 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 KLK7P49862 253 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 APBA1Q02410 837 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 ORC1Q13415 861 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 FIGNQ5HY92 759 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 ARHGAP17Q68EM7 881 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 SPECC1LQ69YQ0 1117 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 SCN4BQ8IWT1 228 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 UBR7Q8N806 425 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 C12orf29Q8N999 325 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 SLC4A11Q8NBS3 891 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 SLC2A14Q8TDB8 520 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 WHAMMQ8TF30 809 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 SMARCD1Q96GM5 515 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 CEP295NLQ96MC4 621 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 ZNF512Q96ME7 567 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-204ENST00000405578 TWNKQ96RR1 684 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 PKMYT1Q99640 499 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 HNRNPABQ99729 332 aaKnown RBP11.16□□□□□ -0.62
RPAIN-204ENST00000405578 NAA15Q9BXJ9 866 aaKnown RBP11.16□□□□□ -0.62
RPAIN-204ENST00000405578 NUCKS1Q9H1E3 243 aaKnown RBP11.16□□□□□ -0.62
RPAIN-204ENST00000405578 GANQ9H2C0 597 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 PDCL3Q9H2J4 239 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 DMAP1Q9NPF5 467 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-204ENST00000405578 NLRC4Q9NPP4 1024 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 FAM49BQ9NUQ9 324 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 MYO6Q9UM54 1294 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 CNTN6Q9UQ52 1028 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 SLC27A5Q9Y2P5 690 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 YIPF1Q9Y548 306 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 ASB3Q9Y575 518 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 INSL5Q9Y5Q6 135 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 ITIH6Q6UXX5 1313 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 F8VZ95 297 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 FOXN3O00409 490 aaPredicted RBP11.15□□□□□ -0.62
RPAIN-204ENST00000405578 AP1G2O75843 785 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 NOL4O94818 638 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 PAPLNO95428 1278 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 SEC24AO95486 1093 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 POU2F2P09086 479 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 HAPLN1P10915 354 aaPredicted RBP11.15□□□□□ -0.62
RPAIN-204ENST00000405578 CCDC130P13994 396 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 CYP2F1P24903 491 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 ADORA2BP29275 332 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 PMLP29590 882 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 GNA15P30679 374 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 SOX5P35711 763 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 PDE6CP51160 858 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 ZNF132P52740 706 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 TWF1Q12792 350 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 TRIM14Q14142 442 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 TSR1Q2NL82 804 aaKnown RBP11.15□□□□□ -0.62
RPAIN-204ENST00000405578 LAIR1Q6GTX8 287 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 PRR23CQ6ZRP0 262 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 TPRG1Q6ZUI0 275 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 FAM35AQ86V20 835 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 FAM71AQ8IYT1 594 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 FUKQ8N0W3 1084 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 CLDN23Q96B33 292 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 B3GNT5Q9BYG0 378 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 PRKD2Q9BZL6 878 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 ZNF518BQ9C0D4 1074 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 KRT82Q9NSB4 513 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 TMLHEQ9NVH6 421 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 CEP83Q9Y592 693 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 NME7Q9Y5B8 376 aa11.15□□□□□ -0.62
RPAIN-204ENST00000405578 ZFP37Q9Y6Q3 630 aaPredicted RBP11.15□□□□□ -0.62
RPAIN-204ENST00000405578 COL4A2P08572 1712 aa11.15□□□□□ -0.63
RPAIN-204ENST00000405578 F5P12259 2224 aa11.15□□□□□ -0.63
RPAIN-204ENST00000405578 ANK1P16157 1881 aa11.15□□□□□ -0.63
RPAIN-204ENST00000405578 GOLGA6L3A6NEY3 463 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 CYP26A1O43174 497 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 THAP12O43422 761 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 GDF9O60383 454 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 LRP3O75074 770 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 FGF19O95750 216 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 SETSIPP0DME0 302 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 CSH1P0DML2 217 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 CSH2P0DML3 217 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 FERP16591 822 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 KRT9P35527 623 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 BCAT1P54687 386 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 NTHL1P78549 312 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 PFKPQ01813 784 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 CNGA2Q16280 664 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 MEA1Q16626 185 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 GOLGA7BQ2TAP0 167 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 PPP1R26Q5T8A7 1209 aaPredicted RBP11.14□□□□□ -0.63
RPAIN-204ENST00000405578 CYP4A22Q5TCH4 519 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 DPY19L2P1Q6NXN4 242 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 PRR23BQ6ZRT6 265 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 MTSS1LQ765P7 747 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 ANKRD52Q8NB46 1076 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 LEMD2Q8NC56 503 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 C8orf48Q96LL4 319 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 GCNAQ96QF7 691 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms