RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CC2D1AQ6P1N0 951 aaPredicted RBP22.04■■□□□ 1.12
TPM1-208ENST00000404484 SLC26A9Q7LBE3 791 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 DCP1BQ8IZD4 617 aaKnown RBP22.04■■□□□ 1.12
TPM1-208ENST00000404484 MICALL1Q8N3F8 863 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 PKMYT1Q99640 499 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 CNPY3Q9BT09 278 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 OXCT2Q9BYC2 517 aaPredicted RBP22.04■■□□□ 1.12
TPM1-208ENST00000404484 ASNSD1Q9NWL6 643 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 EHD2Q9NZN4 543 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 LMCD1Q9NZU5 365 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 TMEM59LQ9UK28 342 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 SPTBN5Q9NRC6 3674 aaKnown RBP22.03■■□□□ 1.12
TPM1-208ENST00000404484 CCDC188H7C350 402 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 RNF8O76064 485 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 FBXO21O94952 628 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 TUBBP07437 444 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 CETN2P41208 172 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 C2orf54Q08AI8 447 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 HADHQ16836 314 aaKnown RBP22.03■■□□□ 1.12
TPM1-208ENST00000404484 EFHC1Q5JVL4 640 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 SPOUT1Q5T280 376 aaKnown RBP22.03■■□□□ 1.12
TPM1-208ENST00000404484 POLNQ7Z5Q5 900 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 CPNE8Q86YQ8 564 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 KATNAL2Q8IYT4 538 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 SIX6OS1Q8N1H7 587 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 NOA1Q8NC60 698 aaKnown RBP22.03■■□□□ 1.12
TPM1-208ENST00000404484 OR10T2Q8NGX3 314 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 C11orf84Q9BUA3 381 aaPredicted RBP22.03■■□□□ 1.12
TPM1-208ENST00000404484 MARCH5Q9NX47 278 aa22.03■■□□□ 1.12
TPM1-208ENST00000404484 GOLGA6L10A0A0M3HER8 536 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 C2CD4BA6NLJ0 364 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 PIK3R2O00459 728 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 DPYSL4O14531 572 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 SART1O43290 800 aaKnown RBP22.02■■□□□ 1.12
TPM1-208ENST00000404484 FGGP02679 453 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 LCP1P13796 627 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 ALDH7A1P49419 539 aaKnown RBP22.02■■□□□ 1.12
TPM1-208ENST00000404484 MAP3K7CLP57077 242 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 PPP2R5EQ16537 467 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 NFE2Q16621 373 aaPredicted RBP22.02■■□□□ 1.12
TPM1-208ENST00000404484 CCDC142Q17RM4 750 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 LONRF2Q1L5Z9 754 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 ZNF280DQ6N043 979 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 FUT10Q6P4F1 479 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 NLRC5Q86WI3 1866 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 SCUBE3Q8IX30 993 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 KLHL23Q8NBE8 558 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 ALG13Q9NP73 1137 aaKnown RBP22.02■■□□□ 1.12
TPM1-208ENST00000404484 DMAP1Q9NPF5 467 aaPredicted RBP22.02■■□□□ 1.12
TPM1-208ENST00000404484 DDX56Q9NY93 547 aaKnown RBP22.02■■□□□ 1.12
TPM1-208ENST00000404484 SMARCAL1Q9NZC9 954 aa22.02■■□□□ 1.12
TPM1-208ENST00000404484 OR6C75A6NL08 312 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 F8VP50 259 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 KRIT1O00522 736 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 GRM6O15303 877 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 PDGFRAP16234 1089 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 FGFR3P22607 806 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 BCAR1P56945 870 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 RNASE9P60153 205 aaKnown RBP22.01■■□□□ 1.11
TPM1-208ENST00000404484 ZNF211Q13398 564 aaPredicted RBP22.01■■□□□ 1.11
TPM1-208ENST00000404484 NAA30Q147X3 362 aaPredicted RBP22.01■■□□□ 1.11
TPM1-208ENST00000404484 VARS2Q5ST30 1063 aaKnown RBP22.01■■□□□ 1.11
TPM1-208ENST00000404484 FAM171A1Q5VUB5 890 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 SPATA2LQ8IUW3 424 aaPredicted RBP22.01■■□□□ 1.11
TPM1-208ENST00000404484 EMC1Q8N766 993 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 EXD1Q8NHP7 514 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 MAIP1Q8WWC4 291 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 RXFP2Q8WXD0 754 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 ZCWPW1Q9H0M4 648 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 CSNK1G1Q9HCP0 422 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 PNPLA8Q9NP80 782 aa22.01■■□□□ 1.11
TPM1-208ENST00000404484 GLI1P08151 1106 aa22■■□□□ 1.11
TPM1-208ENST00000404484 KRT7P08729 469 aa22■■□□□ 1.11
TPM1-208ENST00000404484 PCK1P35558 622 aa22■■□□□ 1.11
TPM1-208ENST00000404484 TAS2R40P59535 323 aa22■■□□□ 1.11
TPM1-208ENST00000404484 ADIGQ0VDE8 80 aa22■■□□□ 1.11
TPM1-208ENST00000404484 GLE1Q53GS7 698 aaKnown RBP22■■□□□ 1.11
TPM1-208ENST00000404484 ODF2Q5BJF6 829 aa22■■□□□ 1.11
TPM1-208ENST00000404484 COLGALT1Q8NBJ5 622 aa22■■□□□ 1.11
TPM1-208ENST00000404484 TSC1Q92574 1164 aa22■■□□□ 1.11
TPM1-208ENST00000404484 MRPL38Q96DV4 380 aaKnown RBP22■■□□□ 1.11
TPM1-208ENST00000404484 RBM41Q96IZ5 413 aaKnown RBP22■■□□□ 1.11
TPM1-208ENST00000404484 SMOQ99835 787 aa22■■□□□ 1.11
TPM1-208ENST00000404484 RBM12Q9NTZ6 932 aaKnown RBP22■■□□□ 1.11
TPM1-208ENST00000404484 PCDHB12Q9Y5F1 795 aa22■■□□□ 1.11
TPM1-208ENST00000404484 H7C4K7 107 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 HSF2BPO75031 334 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 GABBR2O75899 941 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 ZRANB2O95218 330 aaKnown RBP eCLIP21.99■■□□□ 1.11
TPM1-208ENST00000404484 PYGMP11217 842 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 SDC4P31431 198 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 SPPL3Q8TCT6 385 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 FUBP3Q96I24 572 aaKnown RBP eCLIP21.99■■□□□ 1.11
TPM1-208ENST00000404484 CNGB3Q9NQW8 809 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 AAASQ9NRG9 546 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 XIRP2A4UGR9 3374 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 TARSL2A2RTX5 802 aaKnown RBP21.99■■□□□ 1.11
TPM1-208ENST00000404484 LRCH4O75427 683 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 BEST1O76090 585 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 MCM3P25205 808 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms