RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 TTLL2Q9BWV7 592 aa35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 FBXO44Q9H4M3 255 aa35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 ZNF334Q9HCZ1 680 aaPredicted RBP35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 ADAM22Q9P0K1 906 aa35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 NENFQ9UMX5 172 aa35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 MYO16Q9Y6X6 1858 aa35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 C2orf16Q68DN1 1984 aa35.02■■■■□ 3.2
CSNK1E-204ENST00000403904 C5orf42Q9H799 3197 aa35.02■■■■□ 3.2
CSNK1E-204ENST00000403904 SKIV2LQ15477 1246 aaKnown RBP35.02■■■■□ 3.2
CSNK1E-204ENST00000403904 MSANTD4Q8NCY6 345 aa35.02■■■■□ 3.2
CSNK1E-204ENST00000403904 CLEC4CQ8WTT0 213 aa35.02■■■■□ 3.2
CSNK1E-204ENST00000403904 C18orf8Q96DM3 657 aa35.02■■■■□ 3.2
CSNK1E-204ENST00000403904 MYRFLQ96LU7 910 aa35.02■■■■□ 3.2
CSNK1E-204ENST00000403904 ISCUQ9H1K1 167 aa35.02■■■■□ 3.2
CSNK1E-204ENST00000403904 PIDD1Q9HB75 910 aa35.02■■■■□ 3.2
CSNK1E-204ENST00000403904 DNMT3BQ9UBC3 853 aaKnown RBP35.02■■■■□ 3.2
CSNK1E-204ENST00000403904 PAPSS1O43252 624 aaPredicted RBP35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 PAPLNO95428 1278 aa35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 ZBED1O96006 694 aa35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 PTPN2P17706 415 aa35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 CYLC1P35663 651 aaPredicted RBP35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 GABRB2P47870 512 aa35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 MON1BQ7L1V2 547 aa35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 CCDC112Q8NEF3 446 aa35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 TRMT2BQ96GJ1 504 aaKnown RBP35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 COMMD8Q9NX08 183 aa35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 EHD2Q9NZN4 543 aa35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 EPN1Q9Y6I3 576 aaPredicted RBP35.01■■■■□ 3.2
CSNK1E-204ENST00000403904 ZNF263O14978 683 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 POU2F2P09086 479 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 SNX16P57768 344 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 TAF10Q12962 218 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 PTP4A2Q12974 167 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 GRASPQ7Z6J2 395 aaPredicted RBP35■■■■□ 3.19
CSNK1E-204ENST00000403904 FBXO32Q969P5 355 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 LRRC3Q9BY71 257 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 CNGB3Q9NQW8 809 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 NDUFA10O95299 355 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 CCZ1BP86790 482 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 CCZ1P86791 482 aaPredicted RBP35■■■■□ 3.19
CSNK1E-204ENST00000403904 PPP1R2P3Q6NXS1 205 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 PHLDB2Q86SQ0 1253 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 TMC8Q8IU68 726 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 MCOLN2Q8IZK6 566 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 ASAH2Q9NR71 780 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 CDH22Q9UJ99 828 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 SCML2Q9UQR0 700 aa35■■■■□ 3.19
CSNK1E-204ENST00000403904 FAM92AA1XBS5 289 aa34.99■■■■□ 3.19
CSNK1E-204ENST00000403904 NTHL1P78549 312 aa34.99■■■■□ 3.19
CSNK1E-204ENST00000403904 C1QBPQ07021 282 aaKnown RBP34.99■■■■□ 3.19
CSNK1E-204ENST00000403904 PM20D1Q6GTS8 502 aa34.99■■■■□ 3.19
CSNK1E-204ENST00000403904 OR6B2Q6IFH4 312 aa34.99■■■■□ 3.19
CSNK1E-204ENST00000403904 FAM183BPQ6ZVS7 135 aa34.99■■■■□ 3.19
CSNK1E-204ENST00000403904 GPR149Q86SP6 731 aa34.99■■■■□ 3.19
CSNK1E-204ENST00000403904 MSLNLQ96KJ4 702 aa34.99■■■■□ 3.19
CSNK1E-204ENST00000403904 CHORDC1Q9UHD1 332 aaPredicted RBP34.99■■■■□ 3.19
CSNK1E-204ENST00000403904 NOTCH4Q99466 2003 aa34.99■■■■□ 3.19
CSNK1E-204ENST00000403904 DAOAP59103 153 aa34.98■■■■□ 3.19
CSNK1E-204ENST00000403904 CLUL1Q15846 466 aa34.98■■■■□ 3.19
CSNK1E-204ENST00000403904 XYLT1Q86Y38 959 aa34.98■■■■□ 3.19
CSNK1E-204ENST00000403904 PIWIL1Q96J94 861 aaKnown RBP34.98■■■■□ 3.19
CSNK1E-204ENST00000403904 ZNF830Q96NB3 372 aaPredicted RBP34.98■■■■□ 3.19
CSNK1E-204ENST00000403904 SLITRK1Q96PX8 696 aa34.98■■■■□ 3.19
CSNK1E-204ENST00000403904 S1PR5Q9H228 398 aa34.98■■■■□ 3.19
CSNK1E-204ENST00000403904 UXTQ9UBK9 157 aaPredicted RBP34.98■■■■□ 3.19
CSNK1E-204ENST00000403904 FBXO21O94952 628 aa34.97■■■■□ 3.19
CSNK1E-204ENST00000403904 CALB1P05937 261 aa34.97■■■■□ 3.19
CSNK1E-204ENST00000403904 RHOP08100 348 aa34.97■■■■□ 3.19
CSNK1E-204ENST00000403904 MYL4P12829 197 aa34.97■■■■□ 3.19
CSNK1E-204ENST00000403904 MRPS5P82675 430 aaKnown RBP34.97■■■■□ 3.19
CSNK1E-204ENST00000403904 ADAM7Q9H2U9 754 aa34.97■■■■□ 3.19
CSNK1E-204ENST00000403904 IL21Q9HBE4 155 aa34.97■■■■□ 3.19
CSNK1E-204ENST00000403904 GMIPQ9P107 970 aa34.97■■■■□ 3.19
CSNK1E-204ENST00000403904 EIF3CLB5ME19 914 aaKnown RBP34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 LCA5LO95447 670 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 PGFP49763 221 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 BHLHA9Q7RTU4 235 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 VCPIP1Q96JH7 1222 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 EIF3CQ99613 913 aaKnown RBP34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 COL6A3P12111 3177 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 H3BQ06 376 aaPredicted RBP34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 ABCB4P21439 1286 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 GABRR2P28476 465 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 ITIH3Q06033 890 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 PABPC1LQ4VXU2 614 aaKnown RBP34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 GAREM2Q75VX8 874 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 SCML4Q8N228 414 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 PACSIN1Q9BY11 444 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 KCNF1Q9H3M0 494 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 UBE2ZQ9H832 354 aaPredicted RBP34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 STRIP2Q9ULQ0 834 aa34.96■■■■□ 3.19
CSNK1E-204ENST00000403904 YJEFN3A6XGL0 299 aa34.95■■■■□ 3.18
CSNK1E-204ENST00000403904 E7ENQ6 273 aa34.95■■■■□ 3.18
CSNK1E-204ENST00000403904 ARHGAP6O43182 974 aa34.95■■■■□ 3.18
CSNK1E-204ENST00000403904 NRDCO43847 1150 aa34.95■■■■□ 3.18
CSNK1E-204ENST00000403904 EPHA5P54756 1037 aa34.95■■■■□ 3.18
CSNK1E-204ENST00000403904 GALCP54803 685 aa34.95■■■■□ 3.18
CSNK1E-204ENST00000403904 SPA17Q15506 151 aa34.95■■■■□ 3.18
CSNK1E-204ENST00000403904 CES5AQ6NT32 575 aa34.95■■■■□ 3.18
CSNK1E-204ENST00000403904 OLFML1Q6UWY5 402 aa34.95■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms