RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 C6orf222P0C671 652 aaPredicted RBP14.56□□□□□ -0.08
APOB-202ENST00000399256 RFC1P35251 1148 aaPredicted RBP14.56□□□□□ -0.08
APOB-202ENST00000399256 MRPS5P82675 430 aaKnown RBP14.56□□□□□ -0.08
APOB-202ENST00000399256 TMCO4Q5TGY1 634 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 STRIP1Q5VSL9 837 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 TTC39BQ5VTQ0 682 aaPredicted RBP14.56□□□□□ -0.08
APOB-202ENST00000399256 ATG16L1Q676U5 607 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 GPAT2Q6NUI2 795 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 BBS12Q6ZW61 710 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 NUDCD3Q8IVD9 361 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 ARFGAP1Q8N6T3 406 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 POU5F2Q8N7G0 328 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 POLR3FQ9H1D9 316 aaPredicted RBP14.56□□□□□ -0.08
APOB-202ENST00000399256 GPAMQ9HCL2 828 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 S100A14Q9HCY8 104 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 TJP2Q9UDY2 1190 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 SYNPO2Q9UMS6 1093 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 PLLPQ9Y342 182 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 TELO2Q9Y4R8 837 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 A0A088AWK7 358 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 CLRN2A0PK11 232 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 UGT1A9O60656 530 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 ICAM1P05362 532 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 KDELR1P24390 212 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 SLC25A11Q02978 314 aaKnown RBP14.55□□□□□ -0.08
APOB-202ENST00000399256 TAF5Q15542 800 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 NPNTQ6UXI9 565 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 ACAD11Q709F0 780 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 PDSS2Q86YH6 399 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 CRLF3Q8IUI8 442 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 HIPK4Q8NE63 616 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 JOSD2Q8TAC2 188 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 SYTL5Q8TDW5 730 aaPredicted RBP14.55□□□□□ -0.08
APOB-202ENST00000399256 USP6NLQ92738 828 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 MRIQ9BWK5 157 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 UGT1A7Q9HAW7 530 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 UGT1A10Q9HAW8 530 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 UGT1A8Q9HAW9 530 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 XPNPEP1Q9NQW7 623 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 SERPINA10Q9UK55 444 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 FEM1BQ9UK73 627 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 TEX264Q9Y6I9 313 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.55□□□□□ -0.08
APOB-202ENST00000399256 LRCH4O75427 683 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 STAM2O75886 525 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 RBP3P10745 1247 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 TBXAS1P24557 533 aaPredicted RBP14.55□□□□□ -0.08
APOB-202ENST00000399256 EPHB1P54762 984 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 IRX4P78413 519 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 ASPHQ12797 758 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 HIC1Q14526 733 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 TEX44Q53QW1 395 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 RALGPS1Q5JS13 557 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 RNF111Q6ZNA4 994 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 DHDDSQ86SQ9 333 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 SLC26A11Q86WA9 606 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 TTC13Q8NBP0 860 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 SLC26A7Q8TE54 656 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 FAM172AQ8WUF8 416 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 OLFM3Q96PB7 478 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 SEPT9Q9UHD8 586 aaPredicted RBP14.55□□□□□ -0.08
APOB-202ENST00000399256 PPME1Q9Y570 386 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 SLC4A7Q9Y6M7 1214 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 CREB3O43889 395 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 PDE5AO76074 875 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 TOP3BO95985 862 aaKnown RBP14.55□□□□□ -0.08
APOB-202ENST00000399256 CCNFP41002 786 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 AQP4P55087 323 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 NCOA4Q13772 614 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 PGM5Q15124 567 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 PPP1R2P3Q6NXS1 205 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 WDTC1Q8N5D0 677 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 EMC1Q8N766 993 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 TMEM35BQ8NCS4 154 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 HSPH1Q92598 858 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 DTNBP1Q96EV8 351 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 SHCBP1LQ9BZQ2 653 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 IL1RAPL1Q9NZN1 696 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 DNAJB4Q9UDY4 337 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 CNTN6Q9UQ52 1028 aa14.55□□□□□ -0.08
APOB-202ENST00000399256 HBS1LQ9Y450 684 aaKnown RBP14.55□□□□□ -0.08
APOB-202ENST00000399256 FKBP6O75344 327 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 OR6B1O95007 311 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 CAP2P40123 477 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 PTGER2P43116 358 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 MSLNQ13421 630 aaPredicted RBP14.54□□□□□ -0.08
APOB-202ENST00000399256 LSAMPQ13449 338 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 MED21Q13503 144 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 EFHC1Q5JVL4 640 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 SATL1Q86VE3 508 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 KIAA0319LQ8IZA0 1049 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 KCTD6Q8NC69 237 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 NAT14Q8WUY8 206 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 CCDC124Q96CT7 223 aaKnown RBP14.54□□□□□ -0.08
APOB-202ENST00000399256 CALN1Q9BXU9 219 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 RAVER2Q9HCJ3 691 aaKnown RBP14.54□□□□□ -0.08
APOB-202ENST00000399256 ADAMTS6Q9UKP5 1117 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms