RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 NPAS3Q8IXF0 933 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ELMOD1Q8N336 334 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TC2NQ8N9U0 490 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CLEC4CQ8WTT0 213 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 STK32AQ8WU08 396 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 HSFY1Q96LI6 401 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 NECTIN4Q96NY8 510 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MYADMQ96S97 322 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 AGPAT1Q99943 283 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ULBP1Q9BZM6 244 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 HAUS4Q9H6D7 363 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 NMUR1Q9HB89 426 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ABHD10Q9NUJ1 306 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 OSER1Q9NX31 292 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 GMIPQ9P107 970 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ARHGAP20Q9P2F6 1191 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SCML2Q9UQR0 700 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 E5RJQ4 531 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 DDX3XO00571 662 aaKnown RBP eCLIP13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TKTL1P51854 596 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 KLHL30Q0D2K2 578 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PTP4A2Q12974 167 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CYP4A22Q5TCH4 519 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 NAA35Q5VZE5 725 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PM20D1Q6GTS8 502 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 GET4Q7L5D6 327 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CCDC186Q7Z3E2 898 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TMEM110Q86TL2 294 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 LEMD2Q8NC56 503 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FBXO32Q969P5 355 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PIWIL1Q96J94 861 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ZSWIM3Q96MP5 696 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 NUCKS1Q9H1E3 243 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 COMMD8Q9NX08 183 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TAS2R14Q9NYV8 317 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MRPS23Q9Y3D9 190 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 NCANO14594 1321 aa13.07□□□□□ -0.32
HLA-DQB1-203ENST00000399082 NUP210Q8TEM1 1887 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 C2orf78A6NCI8 922 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ZNF840PA6NDX5 716 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 AKR1B15C9JRZ8 316 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PAPSS1O43252 624 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 LSM8O95777 96 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ZBED1O96006 694 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ERBB2P04626 1255 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SERPING1P05155 500 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 USP17L7P0C7H9 530 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 BMP1P13497 986 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 LCP1P13796 627 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SP100P23497 879 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CDC25CP30307 473 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SLC8A3P57103 927 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 DAOAP59103 153 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CLEC16AQ2KHT3 1053 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PUS10Q3MIT2 529 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 C2CD6Q53TS8 623 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SNX30Q5VWJ9 437 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 HFE2Q6ZVN8 426 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 DNAAF5Q86Y56 855 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SCML4Q8N228 414 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TMEM35BQ8NCS4 154 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ZNF397Q8NF99 534 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 OR8K1Q8NGG5 319 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SLC30A5Q8TAD4 765 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ATXN2LQ8WWM7 1075 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CPA5Q8WXQ8 436 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FGF13Q92913 245 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ASB2Q96Q27 587 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SLC22A12Q96S37 553 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PHF7Q9BWX1 381 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FBXO44Q9H4M3 255 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 LRRC4Q9HBW1 653 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CYLDQ9NQC7 956 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 UXTQ9UBK9 157 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CHORDC1Q9UHD1 332 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 NENFQ9UMX5 172 aa13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TCF20Q9UGU0 1960 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB1-203ENST00000399082 A0A1W2PQH9 124 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 YJEFN3A6XGL0 299 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 C2CD4DB7Z1M9 353 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 E7ENQ6 273 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ZNF197O14709 1029 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 OAS1P00973 400 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FECHP22830 423 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MMP8P22894 467 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FCARP24071 287 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MRPS5P82675 430 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CENPCQ03188 943 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TAF12Q16514 161 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ASTE1Q2TB18 679 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TXNDC8Q6A555 127 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TRIM72Q6ZMU5 477 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FMNL3Q8IVF7 1028 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 RIN3Q8TB24 985 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 OVCA2Q8WZ82 227 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MCRS1Q96EZ8 462 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PPP1R13BQ96KQ4 1090 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CHP1Q99653 195 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms