RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 CARD9Q9H257 536 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 ATXN3LQ9H3M9 355 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 CHCHD3Q9NX63 227 aaKnown RBP11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 SLITRK3O94933 977 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 TKTL1P51854 596 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 MTFR1Q15390 333 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 C4orf19Q8IY42 314 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 ST13P4Q8IZP2 240 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 ATP6V0D2Q8N8Y2 350 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 ATP8B4Q8TF62 1192 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 FAM111AQ96PZ2 611 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 VIPAS39Q9H9C1 493 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 TRPM5Q9NZQ8 1165 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 HES2Q9Y543 173 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 BRWD1Q9NSI6 2320 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 COL16A1Q07092 1604 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 GTPBP10A4D1E9 387 aaKnown RBP11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 TBKBP1A7MCY6 615 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 IRF6O14896 467 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 GJB6O95452 261 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 HIC1Q14526 733 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 GRIK4Q16099 956 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 ICE2Q659A1 982 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 KCNK18Q7Z418 384 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 ACTL9Q8TC94 416 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 ZSWIM1Q9BR11 485 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 KIAA1683Q9H0B3 1180 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 AAASQ9NRG9 546 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 DDX43Q9NXZ2 648 aaKnown RBP11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 SLC25A13Q9UJS0 675 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 F5H5T6 163 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 FOXP2O15409 715 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 CAND2O75155 1236 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 PGK1P00558 417 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 TMED1Q13445 227 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 PCNX4Q63HM2 1172 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 USP50Q70EL3 339 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 SLFN11Q7Z7L1 901 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 SCUBE3Q8IX30 993 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 EML4Q9HC35 981 aaKnown RBP11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 ARHGAP20Q9P2F6 1191 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 SMG5Q9UPR3 1016 aaKnown RBP11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 ARL2BPQ9Y2Y0 163 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 MYO1GB0I1T2 1018 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 B2RBV5 119 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 KCNK1O00180 336 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 OVOS1Q6IE37 1185 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 DENND1BQ6P3S1 775 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 SEPT8Q92599 483 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 RANBP17Q9H2T7 1088 aaKnown RBP11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 XPNPEP3Q9NQH7 507 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 LRP6O75581 1613 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 HEATR9A2RTY3 570 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 GARTP22102 1010 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 AP2B1P63010 937 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 CYP24A1Q07973 514 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 BFSP2Q13515 415 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 DGKZQ13574 1117 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 CHI3L2Q15782 390 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 FAM171A1Q5VUB5 890 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 ZNF677Q86XU0 584 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 TSPAN17Q96FV3 270 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 GAD1Q99259 594 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 ACP6Q9NPH0 428 aa11.95□□□□□ -0.5
PCDHGA8-201ENST00000398604 TUBGCP6Q96RT7 1819 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 C5orf58C9J3I9 102 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 CHUKO15111 745 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 NPM3O75607 178 aaKnown RBP11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 TRIM16O95361 564 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 TPH1P17752 444 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 IL10P22301 178 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 PBLDP30039 288 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 NDST1P52848 882 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 POU4F1Q01851 419 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 EVX2Q03828 476 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 BTG3Q14201 252 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 POLD3Q15054 466 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 TLK2Q86UE8 772 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 KIAA0895Q8NCT3 520 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 REPS2Q8NFH8 660 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 ZNF606Q8WXB4 792 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 JADE3Q92613 823 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 SLC5A5Q92911 643 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 ABHD16BQ9H3Z7 469 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 CNTNAP2Q9UHC6 1331 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 CALCAP01258 141 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 STIP1P31948 543 aaKnown RBP11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 IRAK1P51617 712 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 NME5P56597 212 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 ARHGAP15Q53QZ3 475 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 SYDE1Q6ZW31 735 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 ANO5Q75V66 913 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 PPIL6Q8IXY8 311 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 TMEM176AQ96HP8 235 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 WNK4Q96J92 1243 aa11.94□□□□□ -0.5
PCDHGA8-201ENST00000398604 XPO6Q96QU8 1125 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms